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Report for CCDS62156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62156.1 Public Homo sapiens 17 ZNHIT3 24 110 108 CCDS HistoryNCBI Gene:9326Re-query CCDS DB by CCDS ID:62156.1Re-query CCDS DB by GeneID:9326See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620324.4 ENSP00000479727.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620324.4Link to Ensembl Protein Viewer:ENSP00000479727.1Re-query CCDS DB by Nucleotide ID:ENST00000620324Re-query CCDS DB by Protein ID:ENSP00000479727
Original member Current member NCBI NM_001281432.2 NP_001268361.1 Accepted alive Link to Nucleotide Sequence:NM_001281432.2Link to Protein Sequence:NP_001268361.1Re-query CCDS DB by Nucleotide ID:NM_001281432Re-query CCDS DB by Protein ID:NP_001268361Link to BLAST:NP_001268361.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268361.1 148 Q15649-2 148 100% 0 0

Chromosomal Locations for CCDS 62156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 36486700 36486785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36486935 36486966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36492813 36492899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36493926 36494006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36497606 36497766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGCGTCGCTCAAATGTAGCACCGTCGTCTGCGTGATCTGCTTGGAGAAGCCCAAATACCGCTGTCCAG
CCTGCCGCGTGCCCTACTGCTCGGTAGTCTGCTTCCGGAAGCACAAAGAACAGTGCAACCCTGAAACTCG
TCCTGTTGAGAAAAAAATAAGATCAGCTCTTCCTACCAAAACCGTAAAGCCTGTGGAAAACAAAGATGAT
GATGACTCTATAGCTGATTTTCTCAATAGTGATGAGGAAGAAGACAGAGTTTCTTTGCAGAATTTAAAGA
ATTTAGATGGACTCTCGTCCTGTCACCCAGGCTGGAGTGCAGCGGCGCAATCTCGGCTCACTGCAACCTC
TCCCTCCCAGATTCAAGCAATTCTCATGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCTGCCACT
ACGCCCAACCAATTTTTGTATTTTTAG

Translation (148 aa):
MASLKCSTVVCVICLEKPKYRCPACRVPYCSVVCFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKDD
DDSIADFLNSDEEEDRVSLQNLKNLDGLSSCHPGWSAAAQSRLTATSPSQIQAILMPQPPEQLGLQAPAT
TPNQFLYF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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