NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21403.1 Public Mus musculus 7 Ap3b2 23 108 98 CCDS HistoryNCBI Gene:11775Re-query CCDS DB by CCDS ID:21403.1Re-query CCDS DB by GeneID:11775See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21403.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000082090.14 ENSMUSP00000080739.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000082090.14Link to Ensembl Protein Viewer:ENSMUSP00000080739.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000082090Re-query CCDS DB by Protein ID:ENSMUSP00000080739
Original member Current member NCBI NM_021492.3 NP_067467.2 Accepted alive Link to Nucleotide Sequence:NM_021492.3Link to Protein Sequence:NP_067467.2Re-query CCDS DB by Nucleotide ID:NM_021492Re-query CCDS DB by Protein ID:NP_067467Link to BLAST:NP_067467.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067467.2 1082 Q9JME5 1082 100% 0 0

Chromosomal Locations for CCDS 21403.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 81460651 81460801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81460928 81461066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81462904 81463001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81463241 81463325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81463684 81463912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81464091 81464197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81464442 81464502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81464631 81464811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81465140 81465257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81465657 81465765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81466171 81466289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81467435 81467621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81471822 81471998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81473000 81473109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81473387 81473519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81473857 81473919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81476280 81476351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81476741 81476795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81476946 81477229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81477316 81477498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81477588 81477654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81477906 81478066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81484426 81484521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81484836 81484910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81485034 81485109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 81493508 81493620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3249 nt):
ATGTCGGCCGCTCCGGCCTACAGCGAAGACAAGGGCGGCTCAGCCGGTCCCGGGGAGCCAGAATATGGCC
ACGACCCGGCGAGCGGCGGTATCTTCTCCTCGGACTACAAGCGGCATGATGACCTGAAAGAGATGTTGGA
CACCAACAAGGACTCCCTCAAGCTGGAGGCCATGAAGAGGATTGTGGCAATGATCGCCCGGGGAAAGAAT
GCCTCGGACCTGTTCCCTGCAGTGGTGAAGAATGTGGCCTGTAAGAACATAGAGGTGAAGAAGCTTGTCT
ACGTGTATCTGGTCCGATATGCCGAGGAGCAGCAAGACCTCGCTCTACTGTCCATCTCTACTTTCCAACG
TGGCCTAAAGGATCCCAACCAGCTGATCCGTGCCAGTGCGCTCCGGGTTCTCTCTAGCATCCGTGTGCCC
ATCATAGTGCCCATCATGATGCTAGCCATCAAGGAAGCTGCCTCGGACATGTCACCCTACGTTCGGAAAA
CAGCTGCTCATGCCATCCCCAAACTCTACAGTTTGGACTCCGATCAGAAGGACCAGCTGATAGAAGTCAT
TGAGAAGCTTTTGGCAGATAAGACCACGCTGGTGGCAGGCAGTGTAGTGATGGCCTTTGAAGAGGTATGT
CCAGAACGTATTGACCTGATTCACAAAAACTACCGGAAGCTCTGCAACCTGCTCATTGATGTGGAGGAGT
GGGGCCAGGTGGTGATTATCAGCATGCTCACGCGTTATGCGCGAACGCAATTCCTGAGCCCTACGCAGAA
TGAGTCCTTGCTGGAGGAGAATCCCGAGAAGGCCTTCTATGGCTCCGAGGAGGACGAGGCCAAAGGCCCT
GGATCAGAGGAGGCAGCCACTGCGGCGCTGCCCGCTCGGAAGCCCTATGTAATGGACCCAGATCACCGGC
TGCTGCTGCGGAACACCAAGCCCCTGCTGCAGAGCCGCAGCGCCGCGGTGGTCATGGCGGTGGCGCAGCT
TTACTTCCACCTAGCGCCTAAGGCAGAGGTGGGCGTCATCGCCAAGGCGCTGGTACGCCTGCTGCGCAGC
CACAGTGAGGTGCAGTACGTAGTGCTCCAGAACGTGGCCACCATGTCCATCAAGCGCAGGGGTATGTTTG
AACCCTACCTGAAGAGCTTCTACATTAGGTCCACGGATCCTACCCAGATCAAGATCCTGAAGCTGGAAGT
GCTGACCAACCTGGCCAATGAGACTAACATCCCCACTGTTCTCCGGGAATTCCAGACCTACATTCGCAGC
ATGGACAAAGACTTTGTGGCAGCCACGATCCAGGCCATTGGACGATGTGCAACGAACATAGGCCGAGTCC
GTGACACCTGTCTCAATGGCTTGGTGCAGCTTCTGTCCAACCGTGACGAGCTTGTGGTTGCAGAGTCAGT
GGTGGTCATTAAGAAGCTGCTGCAAATGCAGCCAGCGCAGCACGGTGAGATCATCAAACACTTGGCAAAG
CTCACAGACAACATCCAGGTGCCCATGGCACGAGCCAGCATCCTCTGGCTCATTGGAGAGTACTGTGAGC
ATGTCCCCAAGATCGCACCTGATGTCCTGAGAAAAATGGCCAAGTCCTTCACAGCAGAGGAGGACATCGT
GAAGCTGCAGGTCATCAACCTGGCAGCCAAGCTGTACCTGACTAACTCAAAGCAGACCAAGCTCTTGACC
CAGTATGTGCTGAGTCTGGCCAAGTACGACCAGAACTATGATATCCGGGATCGAGCCCGCTTCACCCGGC
AGCTCATTGTTCCCTCTGAGCAGGGTGGTGCCCTCAGTCGCCATGCCAAGAAACTCTTCCTGGCCCCTAA
GCCAGCCCCTATCTTGGAGTCATCCTTCAAAGATCGTGACCATTTCCAGCTGGGCTCACTGTCACACCTG
CTCAATGCAAAGGCTACAGGCTACCAGGAGCTCCCGGACTGGCCAGAGGAAGCCCCAGATCCATCTGTGC
GCAATGTGGAGGTACCTGAATGGACCAAATGTTCAAATCGGGAGAAGAGGAAGGAGAAGGAAAAGCCTTT
CTATTCTGACTCCGAGGGGGAGTCTGGCCCCACTGAGTCTGCAGACAGCGAGCCTGAATCTGAGAGTGAG
TCAGAGAGTAAGAGCAGCAGTGGGAGTGGCTCCGGGGAGTCTAGCAGTGAGTCGGACAATGAAGAAGAGG
ATGAGGAGAAAGGCGGAGGCAGCGAGAGTGAACAGAGTGAGGAGGAAGATGAGAAGAAGAAGAAGACAAA
GAAGAAGAAGGCATCAGAGGGACACAGAGAAGGCTCATCATCAGAAGAGGGCAGTGACTCCAGCAGCAGC
TCAGAGTCTGAGGTGACGTCAGAGTCGGAGGAGGAACAGGTGGAACCTGCCTCCTGGAGGAAGAAAACGC
CTCCAGGCAGCAAGAGTGCCCCTGTAGCCAAGGAGATTTCCCTGCTGGACCTAGAGGATTTCACCCCTCC
TAGTGTCCAGCCTGTGTCTCCTCCCATGGTTGTGTCTACCAGTCTGGCTGCTGACCTGGAAGGGCTGACA
CTCACAGACTCCTCTCTGGTGCCTTCGCTGCTGAGTCCAGTGTCCAGCATTGGGAGGCAGGAGCTGCTGC
ACCGGGTAGCTGGAGAGGGGCTGTCTGTGGACTATGCCTTCAGCCGCCAGCCTTTCTCTGGGGATCCCCA
CATGGTGTCTCTGCATATCTACTTCTCCAACAACTCGGAGACTCCCATCAAGGGGCTGCATGTGGGCACT
CCCAAGCTGCCTGCTGGCATCAGCATTCAAGAATTCCCTGAAATCGAGTCCCTGGCACCTGGAGAATCCA
CCACTACTGTGATGGGCATTAACTTCTGCGACTCAACCCAGGCAGCCAACTTCCAGCTGTGCACCCAAAC
CCGACAGTTCTATGTCTCCATTCAGCCACCTGTCGGGGAGCTGATGGCCCCTGTATTTATGAGTGAGAAT
GAGTTCAAGAAGGAACAGGGAAAGCTGACAGGCATGAATGAGATCACAGAGAAGCTTACATTGCCAGACA
CCTGTCGAAGTGATCACATGGTGGTGCAGAAAGTGACTGCCACCGCCAACCTAGGTCGTGTCCCATGTGG
GACATCTGATGAGTACAGGTTTGCAGGGAGGACATTAACTAGTGGGAGTCTGGTCCTGCTGACTCTGGAT
GCCCGGGCAGCTGGAGCCGCCCAGCTGACCGTCAACAGTGAGAAGATGGTGATTGGCACCATGCTGGTGA
AGGATGTGATTCAGGCTCTGACCCAGTGA

Translation (1082 aa):
MSAAPAYSEDKGGSAGPGEPEYGHDPASGGIFSSDYKRHDDLKEMLDTNKDSLKLEAMKRIVAMIARGKN
ASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVP
IIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVC
PERIDLIHKNYRKLCNLLIDVEEWGQVVIISMLTRYARTQFLSPTQNESLLEENPEKAFYGSEEDEAKGP
GSEEAATAALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAEVGVIAKALVRLLRS
HSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQTYIRS
MDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAK
LTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT
QYVLSLAKYDQNYDIRDRARFTRQLIVPSEQGGALSRHAKKLFLAPKPAPILESSFKDRDHFQLGSLSHL
LNAKATGYQELPDWPEEAPDPSVRNVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESADSEPESESE
SESKSSSGSGSGESSSESDNEEEDEEKGGGSESEQSEEEDEKKKKTKKKKASEGHREGSSSEEGSDSSSS
SESEVTSESEEEQVEPASWRKKTPPGSKSAPVAKEISLLDLEDFTPPSVQPVSPPMVVSTSLAADLEGLT
LTDSSLVPSLLSPVSSIGRQELLHRVAGEGLSVDYAFSRQPFSGDPHMVSLHIYFSNNSETPIKGLHVGT
PKLPAGISIQEFPEIESLAPGESTTTVMGINFCDSTQAANFQLCTQTRQFYVSIQPPVGELMAPVFMSEN
EFKKEQGKLTGMNEITEKLTLPDTCRSDHMVVQKVTATANLGRVPCGTSDEYRFAGRTLTSGSLVLLTLD
ARAAGAAQLTVNSEKMVIGTMLVKDVIQALTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH