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Report for CCDS33579.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33579.1 Public Homo sapiens 21 PWP2 24 110 108 CCDS HistoryNCBI Gene:5822Re-query CCDS DB by CCDS ID:33579.1Re-query CCDS DB by GeneID:5822See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33579.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291576.12 ENSP00000291576.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291576.12Link to Ensembl Protein Viewer:ENSP00000291576.6Re-query CCDS DB by Nucleotide ID:ENST00000291576Re-query CCDS DB by Protein ID:ENSP00000291576
Original member Current member NCBI NM_005049.3 NP_005040.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005049.3Link to Protein Sequence:NP_005040.2Re-query CCDS DB by Nucleotide ID:NM_005049Re-query CCDS DB by Protein ID:NP_005040Link to BLAST:NP_005040.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005040.2 919 Q15269 919 100% 0 0

Chromosomal Locations for CCDS 33579.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44107417 44107434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44108984 44109096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44113753 44113847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44114179 44114278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44114625 44114768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44115264 44115399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44115691 44115920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44117820 44117963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44118763 44118833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44119387 44119523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44120348 44120496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44120631 44120778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44120952 44121102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44122177 44122357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44124580 44124727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44126011 44126119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44126900 44126965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44127932 44128150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44128247 44128397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44128552 44128626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44130597 44130771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2760 nt):
ATGAAGTTCGCTTACCGGTTTTCAAATTTGCTGGGTACGGTGTACCGGCGTGGGAACCTAAATTTTACCT
GC
GATGGAAATTCAGTTATCAGTCCCGTGGGCAATAGAGTCACTGTATTTGACCTTAAAAACAACAAATC
T
GACACGCTGCCCCTGGCCACTCGGTACAACGTCAAGTGCGTGGGGCTGTCCCCGGATGGCCGCCTCGCT
ATC
ATCGTCGATGAAGGGGGCGATGCGCTGCTGGTCAGCCTGGTCTGCAGGTCTGTGCTGCACCACTTCC
AC
TTCAAGGGCTCTGTGCACAGTGTGTCCTTCTCCCCTGATGGCAGGAAGTTTGTTGTCACAAAGGGTAA
C
ATTGCCCAGATGTATCATGCCCCTGGGAAGAAGCGGGAGTTCAACGCCTTCGTTCTGGACAAGACCTAT
TTT
GGGCCCTACGATGAGACCACCTGCATCGACTGGACGGATGACTCCAGGTGCTTTGTGGTTGGGAGCA
AA
GACATGTCCACCTGGGTGTTCGGAGCCGAGCGCTGGGACAACCTCATCTACTATGCACTGGGGGGACA
T
AAGGATGCCATCGTGGCCTGCTTCTTTGAATCCAACAGCCTGGACCTGTACTCACTCAGCCAGGACGGA
GTG
CTGTGCATGTGGCAGTGTGACACGCCCCCCGAGGGCTTGCGGCTGAAGCCCCCTGCGGGCTGGAAAG
CA
GACCTGTTGCAGCGGGAGGAGGAAGAGGAGGAGGAGGAGGACCAGGAGGGCGACAGAGAGACCACCAT
C
CGGGGAAAAGCCACTCCGGCCGAGGAGGAGAAGACAGGAAAAGTGAAGTACTCACGGCTGGCCAAGTAC
TTC
TTCAATAAAGAAGGGGATTTTAACAACCTGACAGCTGCAGCATTTCATAAGAAGTCTCACCTCTTGG
TC
ACTGGCTTTGCTTCTGGAATCTTCCATCTTCATGAGCTGCCAGAGTTTAACCTCATCCACTCCCTGAG
C
ATTTCAGATCAGAGCATCGCCTCAGTGGCCATCAATAGCTCGGGGGACTGGATTGCTTTTGGCTGTTCA
G
GC
CTGGGCCAGCTGCTGGTGTGGGAGTGGCAGAGTGAGTCCTACGTGCTCAAGCAGCAGGGCCACTTCA
AC
AGCATGGTGGCCCTGGCCTACTCGCCCGACGGACAGTACATCGTGACTGGCGGGGACGACGGCAAGGT
C
AAGGTGTGGAACACCCTCAGCGGCTTCTGCTTCGTCACTTTTACGGAGCACTCCAGCGGGGTGACCGGT
GTG
ACCTTTACTGCCACCGGCTACGTTGTGGTGACCTCATCCATGGACGGGACCGTGCGAGCCTTTGACC
TT
CACAGGTACCGAAACTTCCGCACCTTCACCTCTCCACGCCCCACCCAGTTCTCCTGTGTGGCGGTGGA
T
GCGAGCGGTGAGATCGTCTCTGCAGGGGCGCAGGACTCCTTTGAGATTTTCGTGTGGTCCATGCAGACA
GGC
AGGCTCCTTGATGTTTTGTCTGGACACGAAGGGCCCATCAGTGGTCTGTGTTTTAACCCAATGAAGT
CC
GTCCTGGCCAGTGCCTCCTGGGACAAGACAGTGCGCCTATGGGACATGTTTGACAGCTGGAGGACCAA
G
GAGACGCTGGCCCTGACCTCTGATGCTCTGGCTGTGACTTTTCGCCCTGATGGTGCGGAGCTGGCTGTG
GCC
ACACTGAACTCACAGATCACCTTCTGGGACCCTGAGAACGCGGTGCAGACGGGCTCCATTGAGGGCA
GG
CATGACCTCAAGACTGGCAGGAAGGAGCTGGACAAGATTACAGCCAAGCACGCGGCCAAGGGGAAGGC
C
TTCACCGCCCTGTGCTACTCTGCAGACGGCCACAGCATCCTGGCGGGAGGCATGTCCAAGTTCGTGTGC
ATC
TACCACGTCCGTGAGCAGATTCTCATGAAGAGGTTCGAGATCTCTTGCAACCTGTCTTTGGACGCCA
TG
GAGGAATTTTTGAACCGAAGAAAAATGACAGAGTTTGGCAACCTGGCACTAATTGATCAGGATGCTGG
G
CAGGAGGATGGAGTCGCGATACCACTGCCAGGCGTCAGGAAAGGTGACATGAGTTCTCGGCACTTCAAA
CCT
GAGATCAGGGTGACCTCACTCCGCTTCTCTCCCACTGGGCGCTGCTGGGCGGCCACCACCACGGAGG
GA
CTCCTCATCTACTCCCTGGACACCCGCGTGCTCTTTGACCCGTTTGAGCTGGACACCAGCGTCACCCC
C
GGGAGGGTGCGCGAGGCACTGCGCCAGCAGGACTTCACCAGGGCCATCCTCATGGCCCTCCGGCTCAAC
GAG
AGCAAACTGGTGCAGGAGGCCCTGGAGGCGGTGCCCAGGGGCGAGATTGAAGTGGTCACCTCCTCCC
TT
CCTGAACTGTATGTGGAGAAAGTGCTGGAGTTTTTAGCTTCCTCCTTTGAAGTGTCTCGCCACCTGGA
A
TTCTACCTCCTCTGGACTCACAAACTGCTCATGTTGCACGGACAGAAGCTGAAGTCCAGAGCCGGGACG
CTG
CTGCCTGTCATTCAGTTCCTCCAGAAGAGCATCCAGCGGCACCTGGACGACCTGTCGAAACTCTGTA
GC
TGGAACCACTATAACATGCAGTACGCACTAGCAGTTTCCAAGCAGCGGGGCACAAAACGCTCCCTAGA
C
CCGCTGGGAAGTGAGGAGGAGGCAGAAGCATCTGAAGATGACAGCCTGCATCTGCTTGGAGGAGGAGGC
AGA
GACTCAGAAGAAGAGATGCTGGCCTAG


Translation (919 aa):
MKFAYRFSNLLGTVYRRGNLNFTCDGNSVISPVGNRVTVFDLKNNKSDTLPLATRYNVKCVGLSPDGRLA
I
IVDE
GGDALLVSLVCRSVLHHFHFKGSVHSVSFSPDGRKFVVTKGNIAQMYHAPGKKREFNAFVLDKTY
F
GPYDETTCIDWTDDS
RCFVVGSKDMSTWVFGAERWDNLIYYALGGHKDAIVACFFESNSLDLYSLSQDG
V
LCMWQCDTPPEGLRLKPPAGWKADLLQREEEEEEEEDQEGDRETTIRGKATPAEEEKTGKVKYSRLA
KY
F
FNKEGDFNNLTAAAFHKKSHLLVTGFASGIFHLHELPEFNLIHSL
SISDQSIASVAINSSGDWIAFGCS
G
LGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTG
V
TFTATGYVVVTSSMDGTVRAFDLH
RYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQT
G
RLLD
VLSGHEGPISGLCFNPMKSVLASASWDKTVRLWDMFDSWRTKETLALTSDALAVTFRPDGAELAV
A
TLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHAAKG
KAFTALCYSADGHSILAGGMSKFVC
I
YHVREQILMKRFEISCNLSLDAME
EFLNRRKMTEFGNLALIDQDAGQEDGVAIPLPGVRKGDMSSRHFK
P
EIRVTSLRFSPT
GRCWAATTTEGLLIYSLDTRVLFDPFELDTSVTPGRVREALRQQDFTRAILMALRLN
E
SKLVQEALEAVPRGE
IEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQKLKSRAGT
L
LPVIQFLQKSIQRHLDDLSK
LCSWNHYNMQYALAVSKQRGTKRSLDPLGSEEEAEASEDDSLHLLGGGG
R
DSEEEMLA




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser