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Report for CCDS15023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15023.1 Public Mus musculus 1 Acadl 23 108 98 CCDS HistoryNCBI Gene:11363Re-query CCDS DB by CCDS ID:15023.1Re-query CCDS DB by GeneID:11363See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15023.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027153.5 ENSMUSP00000027153.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027153.5Link to Ensembl Protein Viewer:ENSMUSP00000027153.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000027153Re-query CCDS DB by Protein ID:ENSMUSP00000027153
Original member Current member NCBI NM_007381.4 NP_031407.2 Accepted alive Link to Nucleotide Sequence:NM_007381.4Link to Protein Sequence:NP_031407.2Re-query CCDS DB by Nucleotide ID:NM_007381Re-query CCDS DB by Protein ID:NP_031407Link to BLAST:NP_031407.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031407.2 430 P51174 430 99.3023% 0 3

Chromosomal Locations for CCDS 15023.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 66831434 66831527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66836962 66837048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66838279 66838406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66841622 66841735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66843081 66843182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66845168 66845332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66848400 66848466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66853127 66853291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66854624 66854761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66857399 66857554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66863173 66863249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGGCTGCGCGCCTGCTCCTCCGCTCCCTGCGCGTCCTGAGCGCCCGCTCGGCGCCACGCCCGCTGCCCT
CCGCCCGATGTTCTCATTCTGGAGCAGAAGCGCGTCTAGAAACTCCTTCTGCTAAAAAATTAACTGACAT
TGGAATCAGGAGAATCTTTTCCTCGGAGCATGACATTTTCCGGGAGAGTGTAAGGAAGTTTTTCCAAGAA
GAAGTGATTCCTCACCACACAGAATGGGAGAAAGCTGGAGAAGTGAGTAGAGAGGTCTGGGAAAAAGCTG
GCAAGCAGGGCTTGCTTGGCATCAACATCGCAGAGAAACATGGCGGCATTGGTGGGGACTTGCTCTCAAC
AGCAGTTACTTGGGAAGAGCAAGCGTACTCCAATTGCACAGGCCCTGGCTTCAGCCTCCACTCAGATATT
GTCATGCCCTATATTGCGAATTACGGCACAAAAGAACAGATCGAGAAGTTCATCCCCCAGATGACGGCGG
GCAAGTGTATCGGTGCCATAGCCATGACAGAGCCTGGGGCTGGAAGTGACTTACAAGGAGTAAGAACGAA
CGCCAAAAGATCTGGGAGTGATTGGATTCTCAATGGAAGCAAGGTGTTCATCACTAATGGCTGGTTAAGT
GATCTCGTGATCGTCGTGGCCGTCACCAACCGTGAAGCTCGATCGCCTGCCCATGGCATTAGCCTCTTTT
TGGTGGAAAACGGAATGAAAGGATTTATCAAGGGCCGGAAGCTGCATAAGATGGGAATGAAAGCTCAGGA
CACAGCAGAACTATTCTTTGAAGATGTCCGATTGCCAGCTAATGCCTTACTTGGAGAAGAGAATAAAGGC
TTCTACTACCTCATGCAAGAGCTTCCACAGGAAAGGCTCTTAATTGCTGAGTTGGCGATTTCTGCCTGTG
AGTTCATGTTTGAAGAAACCAGGAACTACGTGAAGCAAAGAAAAGCTTTTGGGAAAACAGTTGCACACAT
ACAGACGGTGCAGCATAAACTAGCAGAATTAAAGACACACATATGTGTCACCAGAGCTTTTGTGGACAGC
TGTCTGCAGTTGCATGAAACCAAACGTCTGGACTCCGGTTCTGCTTCCATGGCAAAATACTGGGCATCTG
AATTACAAAACAGTGTAGCTTATGAATGTGTGCAACTCCACGGAGGCTGGGGGTACATGTGGGAGTACCC
GATTGCAAAAGCTTACGTGGATGCTCGGGTGCAGCCGATCTACGGTGGTACCAACGAAATAATGAAAGAG
CTGATCGCAAGACAGATCGTCAGTGACAGCTAG

Translation (430 aa):
MAARLLLRSLRVLSARSAPRPLPSARCSHSGAEARLETPSAKKLTDIGIRRIFSSEHDIFRESVRKFFQE
EVIPHHTEWEKAGEVSREVWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYSNCTGPGFSLHSDI
VMPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLS
DLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGEENKG
FYYLMQELPQERLLIAELAISACEFMFEETRNYVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRAFVDS
CLQLHETKRLDSGSASMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKE
LIARQIVSDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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