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Report for CCDS40175.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40175.1 Public Mus musculus 7 Zfp941 23 108 98 CCDS HistoryNCBI Gene:407812Re-query CCDS DB by CCDS ID:40175.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40175.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106052.1 ENSMUSP00000101667.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106052.1Link to Ensembl Protein Viewer:ENSMUSP00000101667.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106052Re-query CCDS DB by Protein ID:ENSMUSP00000101667
Original member Current member NCBI NM_001001180.2 NP_001001180.2 Accepted alive Link to Nucleotide Sequence:NM_001001180.2Link to Protein Sequence:NP_001001180.2Re-query CCDS DB by Nucleotide ID:NM_001001180Re-query CCDS DB by Protein ID:NP_001001180Link to BLAST:NP_001001180.2

Chromosomal Locations for CCDS 40175.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140811429 140813314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140818588 140818714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140822035 140822037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2016 nt):
ATGGAGCCAATGACATTTGATGATGTGGCCATTATTTTTTCTCCAGAGGAGTGGGAATGTCTGGACTCTG
CTCAGCGGGACTTATACAGGGATGTAATGGTGGAGAATTGCAGAAACCTGCTGTCTGTGGAGGCATCCCG
TCATGGTACCAAAGGCTTTTCATCAAAGAAGGACATGAAGCGTTTCTTCCAAGAAGAGTTAAGGAGAAGA
CTCAGCAAGTGTGGCGCTGACATTTTCCATCCGAGGAAACAGTGGGAGAGTGAGAGGAAGACGGAAAGTC
AAAAAGTGCTGTGCAGTAGACCGTGTGTGACAGCTGACAGTGGTACAGAGAAAAGTGTCTCTGCCAACAG
AGATCAAGGACAGGAAATATCTCAGAAAAGGTCTCCCGTCGTGGCAGTGACTCAAAAAGAGCCCCACCTT
TCAGTCAGCAAACATTCCCAGCCACATTTGAAACTTACCTTTCCTCTGAAAGGAAAGCGGCAATGTCCGA
AAGGGAGCCGACTTCACGACACGACCAGTAAGGTGATCGATTTAAAAAGGAGCACTGGACTGAACTCTTC
CTCAAACATTTCTGTAGCTAGATTAGAATATAAACATATTTCTAAATGTGATCAGTTAGAGAGCTCTTTT
ACAAAAAAGCCATCGCTTTGTAGTAAACAAACAACTTGTGTCAAACTACACAGTGTCAATGAACGTGGGC
AGAAACTTTCTCGTCCCTCACTCTTAAATAAAAAAAAAGGCACAACGATTTGGGACGCGAAGAGGGGAGC
AGAGAGCGTGTGCAAGGAGACTTCTCAGACCGTTCGCCAGAGCGGTATCCTGAATAACTCCCAGGATTCC
TCTACTGGAGAGAAAACTTATGAATGTACGAAGACACACAAAAACTTCAGCGGTGGTTCAGCTCATGGTA
AGCGGGCTCCTTCTCTAGGGAATGTTTTTAGAGGGAACAAATGTGGGGATGTCAGTCATCAGAGCTTAAA
AGATCTTCAGAGTTCCCACCTTCAAGATGAGGCTTACAAGTGTGAGGGATGTGTCCTGACTTTTCGTCAA
AAATCAGATCTCCTAGAACACCAGAAAACTCATGGGAGAGCCAAATCCTACAAATGTGGAGAGTGTGGTA
AAGCTTTTAGCAGTTGTTCAGACCTTAATGTACATCAGAGAAGTCATGATGGAGAGAATCCCCATGAGTG
TAAAGAGTGTGGCAGAGCCTTTGCTAGTGGTAGGGCTTTAGCTCGCCACCAACACACTCATACAGGAAAG
AAATCTTATATCTGTGAAGAGTGTGGCAAAAACTTTAAGAAGGGTTCAAACCTTAATCAACATCTAAGGA
TTCACACTGGAGAGAAACCTTTCAAATGTGAGGACTGTGGCCTAGCTTTTAATCAAAGCTCCCATCTTGC
TAAGCACCAGAGAATTTACGCTGGAGAATGTGGTAGATCCTTTGTCAAGTGTTCCACCAGCAGACGTTGC
CATAGCATTCGTCCTGGAGCGAAGCCCCACAAGTGCAAGCAGTGTGGGAAAACCTTCGTTGATATTTCAA
AGCTTACTCAACACCAAAACGTCCACACTGGCGAGAAACCGTTCAAGTGTAACGAGTGCGGCAAAGCCTT
TAACAGTGGGTTAAGCCTGAAACAACATCAAGTAGTTCACACTGGAGAGAAGCCCTACAAGTGTAAAGAG
TGCGAGAAAGCCTTCACGCAGATTGCAAAGCTTACAGAGCACCAGCGAGTTCATACTGGAGAGAAGCCCT
ATGAGTGCAAGGAATGTGGCAAAGCCTTTCGCAATTTTTCAGCGTTCAATTACCACCACAGAACTCATAC
AGGAGAGAAGCCCTATGAGTGCAAGGAATGTGGCAAAGCTTTTACCAAAAGTTCAGATCTCAAAAGACAT
CACAGAATTCACAGTGGAGAGAAACCTTACAAATGTAACGAGTGTGGCAAAGCCTTTGCCATGAATGTAA
GTCTGAGAGAGCATCAGAGGGTGCATTCTAGAGAGAAACCCTACAAACGTGATTAG

Translation (671 aa):
MEPMTFDDVAIIFSPEEWECLDSAQRDLYRDVMVENCRNLLSVEASRHGTKGFSSKKDMKRFFQEELRRR
LSKCGADIFHPRKQWESERKTESQKVLCSRPCVTADSGTEKSVSANRDQGQEISQKRSPVVAVTQKEPHL
SVSKHSQPHLKLTFPLKGKRQCPKGSRLHDTTSKVIDLKRSTGLNSSSNISVARLEYKHISKCDQLESSF
TKKPSLCSKQTTCVKLHSVNERGQKLSRPSLLNKKKGTTIWDAKRGAESVCKETSQTVRQSGILNNSQDS
STGEKTYECTKTHKNFSGGSAHGKRAPSLGNVFRGNKCGDVSHQSLKDLQSSHLQDEAYKCEGCVLTFRQ
KSDLLEHQKTHGRAKSYKCGECGKAFSSCSDLNVHQRSHDGENPHECKECGRAFASGRALARHQHTHTGK
KSYICEECGKNFKKGSNLNQHLRIHTGEKPFKCEDCGLAFNQSSHLAKHQRIYAGECGRSFVKCSTSRRC
HSIRPGAKPHKCKQCGKTFVDISKLTQHQNVHTGEKPFKCNECGKAFNSGLSLKQHQVVHTGEKPYKCKE
CEKAFTQIAKLTEHQRVHTGEKPYECKECGKAFRNFSAFNYHHRTHTGEKPYECKECGKAFTKSSDLKRH
HRIHSGEKPYKCNECGKAFAMNVSLREHQRVHSREKPYKRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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