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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS88481.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
88481.1 |
Public |
Mus musculus |
13 |
Slc6a18 |
23 |
108 |
98 |
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Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 88481.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000223074.1 |
ENSMUSP00000152146.1 |
Accepted |
alive |
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NCBI |
NM_001168646.1 |
NP_001162117.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001162117.1 |
605 |
O88576-2 |
605 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 88481.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1818 nt): ATGGCACAGGCCTCAGGGATGGACCCGCTTGTGGACATTGAGGATGAAAGACCCAAGTGGGACAACAAAC TCCAGTACCTCCTGAGCTGCATCGGTTTTGCTGTGGGGCTGGGGAACATATGGAGGTTCCCCTACCTGTG CCAGACCCACGGAGGAGGGGCCTTCCTCATCCCCTATTTCATTGCCCTGGTCTTTGAGGGTATCCCGCTT TTCTACATCGAGCTTGCCATTGGCCAGCGCCTACGGAGGGGAAGCATTGGAGTGTGGAAGACCATCTCCC CTTACCTCGGTGGCGTAGGCCTGGGCTGCTTCTCAGTGTCCTTCCTGGTCAGTTTGTACTACAACACGGT TCTCCTGTGGGTCTTATGGTTCTTCCTCAACTCCTTCCAACACCCGCTGCCCTGGAGCACATGTCCGCTG GATCTCAACAGAACAGGATTTGTGCAGGAATGCCAGAGCAGTGGCACCGTGAGCTACTTCTGGTACCGGC AGACTCTGAATATCACATCTGACATCAGCAACACAGGCACTATCCAATGGAAGCTGTTCCTCTGCCTGGT GGCCTGCTGGTCAACTGTGTACCTGTGTGTCATCAGAGGCATTGAGAGCACGGGGAAGGTGATCTACTTT ACAGCCTTATTCCCTTACCTGGTGCTAACCATCTTCCTCATCAGAGGTCTTACCCTGCCTGGAGCAACAG AGGGCCTGATCTACCTGTTTACTCCCAATATGAAGACTCTTCAGAATCCACGGGTGTGGTTGGATGCAGC CACCCAGATTTTCTTCTCCCTGTCCCTGGCCTTTGGAGGGCATATTGCTTTTGCAAGCTACAACCCACCC AGGAACAATTGTGAGAAGGACGCCGTGATTATTGCCCTGGTCAACAGCATGACCTCCCTGTATGCATCCA TCGCCATCTTCTCCGTCATGGGGTTCAAGGCATCCAATGACTATGGAAGGTGCCTGGACAGAAATATCTT GAGCCTCATCAATGAGTTTGACCTTCCAGAGCTTAGCATCTCCAGGGATGAGTACCCATCTGTCCTCATG TACCTGAATGCCACTCAGACTGCGAGGGTGGCCCAACTTCCCCTGAAGACCTGCCATCTGGAAGATTTTC TGGATAAGAGTGCCTCGGGCCCAGGCCTGGCCTTCATCGTTTTCACAGAAGCTGTCCTGCACATGCCAGG TGCTTCTGTGTGGTCTGTGCTCTTCTTTGGGATGCTGTTTACCCTGGGTCTGTCCTCCATGTTTGGGAAC ATGGAGGGTGTCATTACACCACTATTGGACATGGGGATCTTACCCAAAGGTATACCCAAGGAGGTCATGA CTGCCATTTGCTTCACACTGCAGTCTGGAGGCTACTGGTTGGAGATCTTTGACAGTTTTGCAGCTTCTCT GAATTTAATCATCTTCGCCTTCATGGAAGTGGTGGGAGTCATTCACATTTATGGGATGAAACGGTTCTGT GATGACATTGAATGGATGACTGGGCGGCGGCCCGGCCTCTACTGGCAGGTGACATGGAGGGTTGTGAGCC CTATGCTGCTGTTTGGAATCTTCCTGTCCTACATTGTCCTTCTGATCCAGACACCGCCCAGTTACAAGGC CTGGAACCCCCAATATGAACATTTTCCCTCAAGAGAGGAGAAGTTCTACCCAGGCTGGGTGCAGGTCACC TGTGTGCTCCTGTCCTTCCTGCCCTCACTGTGGGTCCCTGGAGTTGCTCTGGCTCAGTTACTGTCCCAGT ACAAACAGAGGTGGAAGGCTACGCATCTGGAAAGTGGTCTGAAGCTACAGGAGAGCAGAGGCTGCTGA
Translation (605 aa): MAQASGMDPLVDIEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPL FYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQHPLPWSTCPL DLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWSTVYLCVIRGIESTGKVIYF TALFPYLVLTIFLIRGLTLPGATEGLIYLFTPNMKTLQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPP RNNCEKDAVIIALVNSMTSLYASIAIFSVMGFKASNDYGRCLDRNILSLINEFDLPELSISRDEYPSVLM YLNATQTARVAQLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGASVWSVLFFGMLFTLGLSSMFGN MEGVITPLLDMGILPKGIPKEVMTAICFTLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYGMKRFC DDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFLSYIVLLIQTPPSYKAWNPQYEHFPSREEKFYPGWVQVT CVLLSFLPSLWVPGVALAQLLSQYKQRWKATHLESGLKLQESRGC
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