NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS15155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15155.1 Public Mus musculus 1 Mlph 23 108 98 CCDS HistoryNCBI Gene:171531Re-query CCDS DB by CCDS ID:15155.1Re-query CCDS DB by GeneID:171531See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15155.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027528.6 ENSMUSP00000027528.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027528.6Link to Ensembl Protein Viewer:ENSMUSP00000027528.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000027528Re-query CCDS DB by Protein ID:ENSMUSP00000027528
Original member Current member NCBI NM_053015.3 NP_443748.2 Accepted alive Link to Nucleotide Sequence:NM_053015.3Link to Protein Sequence:NP_443748.2Re-query CCDS DB by Nucleotide ID:NM_053015Re-query CCDS DB by Protein ID:NP_443748Link to BLAST:NP_443748.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443748.2 590 Q91V27 590 99.661% 0 2

Chromosomal Locations for CCDS 15155.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 90921869 90921978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90927983 90928204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90928323 90928435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90930090 90930193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90931494 90931616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90933317 90933521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90935313 90935452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90937654 90937737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90939359 90939511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90939720 90939875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90941688 90941780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90942872 90942958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90943695 90943749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90945614 90945714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90948583 90948609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1773 nt):
ATGGGGAAAAGGTTGGACCTTTCCACGCTCACAGACGAGGAGGCTGAGCACGTGTGGGCAGTGGTTCAGC
GGGACTTTGACCTCAGGAGGCGAGAGGAAGAAAGACTCCAGGGGCTGAAGGGCAAAATACAAAAGGAGAG
CTCCAAGAGGGAGCTGCTGTCGGACACAGCCCATCTGAATGAGACTCACTGTGCCCGCTGCCTGCAGCCC
TACCGGCTGCTCCTGAACAGCAGACGACAGTGCCTAGAGTGCAGCCTCTTCGTCTGCAAAAGCTGCAGCC
ACGCCCACCCAGAAGAGCAGGGCTGGCTCTGCGACCCCTGCCACCTGGCCAGGGTCGTGAAGATCGGTTC
TCTGGAGTGGTACTACCAGCACGTGAGGGCTCGCTTCAAGCGTTTCGGGAGTGCCAAAGTGATCCGGTCT
CTCTGTGGGCGGCTGCAGGGTGGAGGTGGATCTGAGCCAAGCTTGGAAGAAGGAAATGGAGACAGTGAGC
AGACTGATGAGGATGGAGACCTGGACACAGAGGCCAGAGACCAGCCCCTCAACAGCAAAAAGAAAAAGCG
CCTGCTCTCCTTCCGAGATGTGGACTTTGAGGAAGACTCAGACCACTTGGTGCAGCCTTGCAGCCAAACC
TTGGGCCTGTCCTCAGTCCCTGAGTCTGCACACAGCCTGCAGTCCCTCTCAGGTGAGCCCTACTCTGAGG
ACACCACCTCTCTGGAGCCCGAGGGCCTAGAGGAGACTGGTGCAAGGGCTTTGGGATGTCATCCCAGTCC
TGAAGTGCAGCCATGTAGCCCTTTACCCTCTGGGGAGGATGCTCACGCTGAACTGGACTCGCCTGCAGCA
TCCTGCAAGAGTGCCTTTGGGACCACAGCTATGCCTGGAACAGACGATGTCAGGGGCAAACATCTGCCCT
CACAGTACCTGGCTGATGTAGACACCTCTGATGAAGACAGTATCCAGGGTCCCAGGGCAGCCTCCCAGCA
TAGCAAGAGGAGGGCCCGGACTGTGCCTGAGACTCAGATCTTGGAGTTGAACAAGCGAATGTCAGCTGTG
GAGCACCTGCTAGTCCACCTGGAGAATACGGTTCTGCCACCCTCAGCCCAGGAACCAACTGTGGAGACAC
ACCCCAGTGCTGACACAGAGGAGGAGACACTCAGGAGGAGGCTGGAGGAGCTGACCAGCAACATCAGTGG
TTCCAGCACCTCATCAGAAGATGAGACCAAGCCAGATGGCACCTTCCTTGGAGGGTCCCCAAAGGTGTGC
ACAGACACAGGGCACATGGAGACACAGGAAAGGAACCCTCGGAGCCCTGGGAACCCTGCTCGGCCTACAA
AAAGCACAGATGAGGAGCTCTCTGAGATGGAGGATAGAGTGGCCATGACAGCCTCTGAAGTTCAGCAGGC
TGAGAGTGAGATCTCAGACATCCAGTCCAGGATCGCAGCTCTGAGAGCCGCAGGACTCACAGTGAAGCCC
TCGGGAAAACCTCGGAGAAAGTCAGGCATCCCGATCTTTCTTCCCCGCGTTACTGAGAAACTTGACAGGA
TCCCAAAGACTCCACCTGCAGACCCTGATGACCAAGCCAAGATGCCCAAGGCAACAACAGCTGTGCCCTC
TCTCCTGAGGAGGAAGTATTCTCCCAGCAGCCAAGGCGTAGACAGTGGTTCTTTTGATCGGAAATCAGTG
TACCGTGGCTCGCTGACACAAAGGAACCCTAACGGGAGGAGAGGGACAGCCAGACACATCTTCGCGAAAC
CCGTGATGGCCCAGCAGCCCTAA

Translation (590 aa):
MGKRLDLSTLTDEEAEHVWAVVQRDFDLRRREEERLQGLKGKIQKESSKRELLSDTAHLNETHCARCLQP
YRLLLNSRRQCLECSLFVCKSCSHAHPEEQGWLCDPCHLARVVKIGSLEWYYQHVRARFKRFGSAKVIRS
LCGRLQGGGGSEPSLEEGNGDSEQTDEDGDLDTEARDQPLNSKKKKRLLSFRDVDFEEDSDHLVQPCSQT
LGLSSVPESAHSLQSLSGEPYSEDTTSLEPEGLEETGARALGCHPSPEVQPCSPLPSGEDAHAELDSPAA
SCKSAFGTTAMPGTDDVRGKHLPSQYLADVDTSDEDSIQGPRAASQHSKRRARTVPETQILELNKRMSAV
EHLLVHLENTVLPPSAQEPTVETHPSADTEEETLRRRLEELTSNISGSSTSSEDETKPDGTFLGGSPKVC
TDTGHMETQERNPRSPGNPARPTKSTDEELSEMEDRVAMTASEVQQAESEISDIQSRIAALRAAGLTVKP
SGKPRRKSGIPIFLPRVTEKLDRIPKTPPADPDDQAKMPKATTAVPSLLRRKYSPSSQGVDSGSFDRKSV
YRGSLTQRNPNGRRGTARHIFAKPVMAQQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH