NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS51259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51259.1 Public Mus musculus 4 Eps15 23 108 98 CCDS HistoryNCBI Gene:13858Re-query CCDS DB by CCDS ID:51259.1Re-query CCDS DB by GeneID:13858See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51259.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030281.11 ENSMUSP00000030281.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030281.11Link to Ensembl Protein Viewer:ENSMUSP00000030281.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000030281Re-query CCDS DB by Protein ID:ENSMUSP00000030281
Original member Current member NCBI NM_001159964.1 NP_001153436.1 Accepted alive Link to Nucleotide Sequence:NM_001159964.1Link to Protein Sequence:NP_001153436.1Re-query CCDS DB by Nucleotide ID:NM_001159964Re-query CCDS DB by Protein ID:NP_001153436Link to BLAST:NP_001153436.1

Chromosomal Locations for CCDS 51259.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 109343186 109343356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109361163 109361324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109361670 109361867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109363179 109363379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109366124 109366240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109366418 109366508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109368945 109368980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109370542 109370678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109373223 109373292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109378265 109378341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109379867 109380029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109382785 109382966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109385319 109385465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1752 nt):
ATGTATTTAAAAAGCGATTCAGGATTAGGAGGATGGATAGCCATACCAGCTGTAGCTGATGTTCTCAGAT
ACTCTTGCATTGTTTGCTGGTCTTCTAGGGAAAAGAACAATGTGGAGCAGGACCTTAAAGAGAAGGAAGA
CACAGTTAAGCAGAGGACCAGTGAGGTTCAGGATCTTCAAGATGAAGTTCAAAGGGAGAGTATTAATCTA
CAAAAACTGCAGGCCCAGAAGCAGCAGGTGCAGGAGCTCCTGGGTGAACTGGATGAGCAGAAAGCCCAGC
TGGAGGAGCAGCTCCAGGAAGTCAGGAAAAAGTGTGCTGAGGAGGCCCAGCTGATTTCTTCCCTGAAAGC
AGAAATAACTAGTCAAGAATCTCAGATCTCCAGTTATGAGGAAGAACTGTTGAAAGCTAGAGAAGAACTA
AGTCGCCTACAACAAGAAACAGCACAATTGGAAGAAAGTGTGGAGTCAGGGAAGGCTCAGCTGGAACCTC
TTCAGCAGCACCTACAAGAGTCACAACAGGAAATCAGCTCAATGCAAATGAGATTGGAAATGAAAGATCT
GGAAACTGATAATAACCAATCAAATTGGAGCAGTAGCCCACAAAGCGTTCTTGTTAATGGTGCTACAGAT
TACTGTAGCCTCAGCACCAGCAGCAGTGAAACAGCCAACTTCAACGAACATGCTGAAGGCCAAAACAACC
TAGAGTCTGAACCCACACACCAGGAGTCCTCAGTAAGAAGTAGTCCTGAAATCGCACCTTCTGATGTGAC
TGATGAAAGTGAGGCTGTGACTGTGGCTGGTAATGAGAAAGTTACTCCGAGATTTGACGATGACAAGCAC
TCAAAAGAGGAAGATCCATTTAATGTAGAATCAAGTTCACTGACAGATGCAGTTGCAGATACAAACTTGG
ATTTTTTCCAGTCTGATCCTTTTGTTGGCAGTGATCCTTTCAAGGATGATCCTTTTGGAAAAATTGATCC
ATTTGGTGGTGACCCTTTCAAAGGCTCAGATCCTTTTGCGTCTGATTGCTTCTTTAAGCAGACTTCTACT
GATCCTTTTACCACTTCAAGTACGGACCCTTTCAGTGCATCCAGCAACAGCAGTAATACATCGGTAGAAA
CTTGGAAGCACAATGACCCATTTGCTCCTGGTGGAACAGTTGTTGCTGCAGCGAGTGATTCAGCCACAGA
CCCTTTTGCTTCTGTTTTCGGAAATGAATCATTTGGAGATGGATTTGCTGACTTCAGCACATTATCAAAG
GTCAACAATGAAGATGCTTTTAATCCTACCATATCAAGTTCTACCAGCAGTGTGACCATTGCAAAACCTA
TGTTAGAGGAAACAGCCAGCAAGAGTGAAGATGTGCCTCCAGCACTGCCGCCCAAAGTTGGCACTCCAAC
AAGACCTTGCCCGCCACCCCCTGGGAAAAGACCCATCAACAAATTGGATTCTTCTGATCCCCTTAAACTG
AATGATCCATTTCAGCCTTTCCCAGGCAATGATAGTCCCAAAGAAAAAGATCCTGATATGTTTTGTGATC
CATTCACTTCTTCTACCACTACCAATAAAGAGGCTGACCCAAGCAATTTTGCTAACTTCAGTGCTTATCC
CTCTGAAGAAGATATGATTGAATGGGCAAAAAGGGAAAGTGAGCGGGAAGAAGAACAGAGGCTTGCCAGA
CTAAATCAGCAGGAGCAAGAAGACTTGGAACTGGCCATTGCACTTAGCAAATCTGAGATCTCAGAAGCAT
GA

Translation (583 aa):
MYLKSDSGLGGWIAIPAVADVLRYSCIVCWSSREKNNVEQDLKEKEDTVKQRTSEVQDLQDEVQRESINL
QKLQAQKQQVQELLGELDEQKAQLEEQLQEVRKKCAEEAQLISSLKAEITSQESQISSYEEELLKAREEL
SRLQQETAQLEESVESGKAQLEPLQQHLQESQQEISSMQMRLEMKDLETDNNQSNWSSSPQSVLVNGATD
YCSLSTSSSETANFNEHAEGQNNLESEPTHQESSVRSSPEIAPSDVTDESEAVTVAGNEKVTPRFDDDKH
SKEEDPFNVESSSLTDAVADTNLDFFQSDPFVGSDPFKDDPFGKIDPFGGDPFKGSDPFASDCFFKQTST
DPFTTSSTDPFSASSNSSNTSVETWKHNDPFAPGGTVVAAASDSATDPFASVFGNESFGDGFADFSTLSK
VNNEDAFNPTISSSTSSVTIAKPMLEETASKSEDVPPALPPKVGTPTRPCPPPPGKRPINKLDSSDPLKL
NDPFQPFPGNDSPKEKDPDMFCDPFTSSTTTNKEADPSNFANFSAYPSEEDMIEWAKRESEREEEQRLAR
LNQQEQEDLELAIALSKSEISEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH