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Report for CCDS15671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15671.1 Public Mus musculus 2 Proser2 23 108 98 CCDS HistoryNCBI Gene:227545Re-query CCDS DB by CCDS ID:15671.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15671.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054254.11 ENSMUSP00000060780.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054254.11Link to Ensembl Protein Viewer:ENSMUSP00000060780.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000054254Re-query CCDS DB by Protein ID:ENSMUSP00000060780
Original member Current member EBI ENSMUST00000114942.8 ENSMUSP00000110592.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114942.8Link to Ensembl Protein Viewer:ENSMUSP00000110592.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114942Re-query CCDS DB by Protein ID:ENSMUSP00000110592
Original member NCBI NM_001159657.1 NP_001153129.1 Updated not alive Link to Nucleotide Sequence:NM_001159657.1Link to Protein Sequence:NP_001153129.1Re-query CCDS DB by Nucleotide ID:NM_001159657Re-query CCDS DB by Protein ID:NP_001153129
Current member NCBI NM_001159657.2 NP_001153129.1 Accepted alive Link to Nucleotide Sequence:NM_001159657.2Link to Protein Sequence:NP_001153129.1Re-query CCDS DB by Nucleotide ID:NM_001159657Re-query CCDS DB by Protein ID:NP_001153129Link to BLAST:NP_001153129.1
Original member NCBI NM_144883.4 NP_659132.2 Updated not alive Link to Nucleotide Sequence:NM_144883.4Link to Protein Sequence:NP_659132.2Re-query CCDS DB by Nucleotide ID:NM_144883Re-query CCDS DB by Protein ID:NP_659132
Current member NCBI NM_144883.5 NP_659132.2 Accepted alive Link to Nucleotide Sequence:NM_144883.5Link to Protein Sequence:NP_659132.2Re-query CCDS DB by Nucleotide ID:NM_144883Re-query CCDS DB by Protein ID:NP_659132Link to BLAST:NP_659132.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153129.1 471 Q8C5R2 471 100% 0 0
NP_659132.2 471 Q8C5R2 471 100% 0 0

Chromosomal Locations for CCDS 15671.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 6100336 6101360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6102813 6103065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6113893 6114030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1416 nt):
ATGCCTGGGAACCAGCAGAAACCAGAGTCTCTGGAGACGGACTCTGACACGTCGCCCAGCTGCGGGCTCA
GCGACTTGAGCAGAGGTGGCAGTCTGGAGAGCCGGTGCAGCAGTTCGCGGTCCAGAAGTTTCACTATGGA
TGACGAGAGCCTGAAGCACCTCACACATGAGGAAAAGGACGTTATCCTGTTCTTTGAAGAGACTCTTGAT
TCCCTGGAATATGACTTTGACGAGCCAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTCCACAGTCTC
TGGAAGAGAGCCCTTCCAGCCACTCTGAGCCCGAAGATGTCATCGATTTAGTGCAGCCCGCACCTGCGTC
TGGGGAAGCTGAGAGCCTTCCAGATATGCCTCAAGTAACAGGGGCCCCATCTGATACAAAACATGGCACT
CCATTTCTTGAAGGTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGG
TGTTTCCTTTGCCGCCCTCCCTGCCTGTCCCCGCTCCCTCTGCCCCGCGAAAGGAGCTGATGTCCCCCTC
TCCTCCAGCAGAGCATCCCAAACTGCTGCGTTCTGTGCCCACTCCTCTGGTGATTGCTCAGAAAATATCT
GAGAAGTTGGCGGGCAATGAAGCCCTGTCTCCCACATCCCCTTCAAAGGAAGGCAGGCCTGGGGAATGGA
GGACACCGACTTCTCCAGCTTCTAGAAACGGAGACCATGTCGGCGTGTGGCATCGACACACGACCCAGTC
AGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAG
ACCATCTCCAAGGCGGCTGTCAATGTGCAGGAGCGCAAGGCCCAGGTCCTGGCCAACATCAACGGCATGT
CCTTCATCGCTGCGGGCGACACATCATCAGAAGAGCGGTGGCAGAAGGCGGAAGAGCAGAGGAGTGGCTC
TGCGGATGGAGCACGCACCCTGGGCAGAGCGGGCATGGCCGGCGAGCCCGGGGCACCTTGTGCAGGAGTC
CCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCAGA
GCGTACACGAGGCCCTGCGCAGCGAGCCCAGCTCCTTCGTCCCCACCAGCAAGACCATCACCTTCCGGCC
TGACCCCGCTGTGACCGGCAAGCTGGCGCGCCAGAATGCCAGCCGCAGCCTATACGAACCGCGCCCGGAC
GGCAGCCAAGATGCCCGCAAGCGCACGGGCTCGCTCCCCCGGGCGGTGGGTTTCCGGCCGCAGGGCATCA
CAGTGCAGTTCTCTGGCCGCGGCTCCACTGAGGAAGCTCGGCGCGAGGCTCTGCGCAAACTCGGGCTACT
GAAGGAGAACTTGTGA

Translation (471 aa):
MPGNQQKPESLETDSDTSPSCGLSDLSRGGSLESRCSSSRSRSFTMDDESLKHLTHEEKDVILFFEETLD
SLEYDFDEPALCDSGIHCHSPQSLEESPSSHSEPEDVIDLVQPAPASGEAESLPDMPQVTGAPSDTKHGT
PFLEGGKQAAENSLPPPDSRGPEVFPLPPSLPVPAPSAPRKELMSPSPPAEHPKLLRSVPTPLVIAQKIS
EKLAGNEALSPTSPSKEGRPGEWRTPTSPASRNGDHVGVWHRHTTQSAPKVHRFPSNISVTNSAGKDFNK
TISKAAVNVQERKAQVLANINGMSFIAAGDTSSEERWQKAEEQRSGSADGARTLGRAGMAGEPGAPCAGV
PARAQQSRAVQTEQPPALANGFQSVHEALRSEPSSFVPTSKTITFRPDPAVTGKLARQNASRSLYEPRPD
GSQDARKRTGSLPRAVGFRPQGITVQFSGRGSTEEARREALRKLGLLKENL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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