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Report for CCDS37083.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37083.1 Public Mus musculus 15 Washc5 23 108 98 CCDS HistoryNCBI Gene:223593Re-query CCDS DB by CCDS ID:37083.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37083.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022976.5 ENSMUSP00000022976.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022976.5Link to Ensembl Protein Viewer:ENSMUSP00000022976.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022976Re-query CCDS DB by Protein ID:ENSMUSP00000022976
Original member Current member NCBI NM_153548.3 NP_705776.2 Accepted alive Link to Nucleotide Sequence:NM_153548.3Link to Protein Sequence:NP_705776.2Re-query CCDS DB by Nucleotide ID:NM_153548Re-query CCDS DB by Protein ID:NP_705776Link to BLAST:NP_705776.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705776.2 1159 Q8C2E7-1 1159 100% 0 0

Chromosomal Locations for CCDS 37083.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 59332303 59332359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59333618 59333705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59335088 59335241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59337193 59337289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59338914 59339043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59339814 59339917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59340892 59340971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59341060 59341162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59341939 59342101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59344025 59344149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59345338 59345517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59346214 59346315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59346820 59346900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59348385 59348525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59349293 59349403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59350132 59350207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59350287 59350453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59351472 59351584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59352501 59352630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59355834 59355961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59359263 59359434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59361123 59361236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59363194 59363346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59366163 59366355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59367395 59367495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59368376 59368460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59369153 59369298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59369880 59370065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3480 nt):
ATGTTGGACTTCCTGGCTGAGAATAATCTCTGTGGCCAGGCCATCCTGAGGATCGTCTCCTGTGGCAATG
CCATCATTGCCGAGGTGCTGCGGCTCTCTGAGTTCATTCCTGCTGTGTTCCTGCTGAAAGACCGGGCTGA
CCAGCAGAGATATGGAGACATCATCTTTGACTTCAGCTACTTTAAGGGTCCAGAGTTCTGGGAAAGCAAA
CTGGAAGCCAAGCCTGAGCTGCAGGATTTAGATGAAGAATTTCGGGAAAACAACATAGAAATCGTGACCA
GATTTTATTTAGCCTTTCAAAGTGTGCATAAATACATTGTAGACTTAAACAGATACCTCGATGACCTCAA
TGAAGGAGTTTATATTCAGCAAACCTTAGAAACCGTGCTTCTCAGTGAAGATGGAAAACAACTTCTATGT
GAAGCCCTGTACTTATATGGAGTTATGCTGCTTGTCATCGACCAGAAGATTGAAGGAGAAGTCAGAGAGA
GAATGCTGGTTTCTTACTATCGATACAGTGCTGCTCGGTCCTCTGCTGACTCAAACATGGATGATATCTG
TAAGCTGCTACGAAGCACAGGATATTCCAGCCAGCCAGGAGCCAAAAGACCACCCAACTATCCTGAGAGC
TATTTCCAGAGAGTGCCTATCAACGAGACGTTCATCAGCATGGTCATCGGACGCCTGAGGTCTGATGACA
TTTACAACCAGGTCTCTGCCTACCCGCTGCCGGAGCACCGCAGCACTGCCCTGGCCAATCAAGCCGCCAT
GCTCTACGTGATTCTCTATTTTGAACCTTCCATTCTTCACACCCACCAAGCAAAAATGAGAGAGATCGTG
GATAAGTACTTTCCAGATAACTGGGTAATCAGCATCTATATGGGTATCACTGTTAATCTAGCTGATGCCT
GGGAACCTTACAAAGCTGCGAAAACTGCTCTCAACAACACCCTTGACCTCGCCAATGTCAAAGAACAGGC
AAGCAGATACGCTAGTGTCAGCGACAGAGTGCGCGCTCAGGTGCAGCAGTTTCTGAAAGAGGGCTACCTG
AGGGAGGAGGTGCTTCTGGACAACATCCCCAGGCTGCTGAACTGCCTGAGAGACTGCAATGTCGCCATCC
GCTGGCTAATGCTCCACACAGCCGACTCAGCCTGTGACCCAAACAACAAGCGCCTTCGTCAAATCAAGGA
CCAGATTCTGGCAGACTCTAGGTACAATCCCAAGATCCTCTTCCAGTTGCTATTGGACACTGCACAATTC
GAGTTTATACTCAAAGAGATGTTCAAGCAAATGCTTTCCGAGAAACAGTCCAAGTGGGAGCATTACAAGA
AGGAGGGCTCTGAGCGCATGACCGAGCTTGCTGACGTCTTTTCAGGGGTGAAACCACTAACCCGAGTGGA
GAAAAACGAAAATCTTCAAGCTTGGTTCAGAGAGATCTCAAAACAAATACTGTCTCTAAATTATGATGAT
TCTACTGCTGCAGGCAGAAAAACTGTGCAACTAATACAAGCTCTGGAAGAGGTTCAGGAGTTTCACCAGT
TGGAATCAAATCTACAAGTTTGCCAGTTTCTAGCTGACACCCGAAAGTTTCTCCATCAAATGATCAGAAC
CATCAACATCAAGGAGGAAGTCCTGATCACAGTGCAGATCATCGGGGACCTTTCCTTTGCCTGGCAGTTA
ATTGACAGTTTCACATCCATCATGCAAGAAAGCATAAGGGTAAACCCATCCATGGTTACCAAACTCAGAG
CCACGTTCCTAAAGCTTGCCTCTGCCCTTGACCTTCCCCTGCTACGTATTAATCAAGCAAATAGCCCTGA
TCTCCTCAGTGTGTCTCAGTATTATTCAGGAGAATTGGTGTCATACGTGAGAAAGGTTTTGCAGATCATT
CCAGAAAGCATGTTCACATCTCTCCTGAAGATCATAAAGCTTCAGACCCATGACATCATGGAAGTGCCTA
CACGCCTGGACAAGGACAAGCTGCGGGACTACGCTCAGCTTGGCCCGAGATATGAGGTTGCCAAGCTCAC
TCACGCCATCTCCATCTTTACTGAGGGCATCTTGATGATGAAAACGACCCTGGTGGGCATCATCAAGGTG
GATCCCAAGCAGTTGCTGGAAGACGGAATAAGGAAAGAGCTGGTTAAACGCGTGGCTTTCGCCCTTCACC
GGGGACTGATATTCAACCCTCGTGCCAAGCCAAGTGAGTTGATGCCCAAACTGAAAGAGCTGGGGGCCAC
CATGGATGGGTTCCATCGCTCCTTTGAGTATATACAGGACTACGTCAGCATTTACGGTCTGAAGATTTGG
CAGGAGGAAGTCTCTCGTATTATAAATTATAACGTGGAACAGGAGTGTAATAACTTCTTAAGAACAAAGA
TTCAAGACTGGCAGAGTATGTACCAATCCACTCATATACCAATCCCGAAGTTTGCACCTGTGGATGAGTC
TATAACATTTATTGGTCGACTCTGCAGAGAAATCTTGCGGATCACAGACCCAAAAATGACATGTTACATA
GACCAGCTGAACACTTGGTATGACGTGAAAACTCATCAAGAAGTGACCAGCAGTCGCCTCTTCTCAGAAA
TCCAGACCACCTTGGGGACTTTTGGTCTGAATGGATTGGACAGGCTTCTGTGCTTCATGATTGTGAAAGA
GCTACAGAATTTCCTCAGTATGTTTCAGAAAATTATCCTGAAAGAGAGAACTGTTCAAGAAACTTTAAAG
ATGCTCATGAGTGCTGTTAACCCTCTAAAGAGCATAGTGGCAAATTCAAGTAAAGTTTATCTTTCTGCCA
TCACCAAAACACAGAAGATCTGGAGTGCTTACCTGGAGGCTATAATGAAGGTTGGACAGATGCAGATCCT
GAGACAACAGATCGCCAATGAGCTAAACTCTTCCTGTCGATTTGATTCCAGACATCTGGCAGCTGCCCTG
GATAATCTCAATAAGGCTCTCCTGGCAGACATCGAAGCCCACTACCGGGACCCTTCGCTTCCTTACCCCA
AAGAAGATAACACACTCTTATATGAAATCACAGCCTATCTGGAGGCGGCTGGCATTCACAACCCCCTGAA
TAAGATTTACATAACAACGAAGCGCTTACCCTATTTCCCGATTGTCAACTTTCTGTTTTTGATCGCGCAG
TTGCCAAAACTTCAGTATAACAAAAATCTAGGCATGGTCTGCCGGAAGCCTGCCGACCCTGTTGACTGGC
CACCGCTCGTCCTAGGTCTGCTCACGCTGCTGAAGCAGTTCCACTCCCGGTACACCGAGCAATTCCTGGC
ACTGATTGGCCAGTTTATTCGCTCCACAATGGAGCAGTGCACAAGCCAGAAGATGCCTGAAATGCCTGCA
GATGCTGTGGGCGCCCTTCTCTTCCTGGAGGATTATGTTCGGTATACAAAACTCCCCCGAAGGGTGGCTG
AAGCCCATGTGCCTAACTTCATTTTTGATGAATTCCGAACAGTCCTGTGA

Translation (1159 aa):
MLDFLAENNLCGQAILRIVSCGNAIIAEVLRLSEFIPAVFLLKDRADQQRYGDIIFDFSYFKGPEFWESK
LEAKPELQDLDEEFRENNIEIVTRFYLAFQSVHKYIVDLNRYLDDLNEGVYIQQTLETVLLSEDGKQLLC
EALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSADSNMDDICKLLRSTGYSSQPGAKRPPNYPES
YFQRVPINETFISMVIGRLRSDDIYNQVSAYPLPEHRSTALANQAAMLYVILYFEPSILHTHQAKMREIV
DKYFPDNWVISIYMGITVNLADAWEPYKAAKTALNNTLDLANVKEQASRYASVSDRVRAQVQQFLKEGYL
REEVLLDNIPRLLNCLRDCNVAIRWLMLHTADSACDPNNKRLRQIKDQILADSRYNPKILFQLLLDTAQF
EFILKEMFKQMLSEKQSKWEHYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREISKQILSLNYDD
STAAGRKTVQLIQALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINIKEEVLITVQIIGDLSFAWQL
IDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRINQANSPDLLSVSQYYSGELVSYVRKVLQII
PESMFTSLLKIIKLQTHDIMEVPTRLDKDKLRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKV
DPKQLLEDGIRKELVKRVAFALHRGLIFNPRAKPSELMPKLKELGATMDGFHRSFEYIQDYVSIYGLKIW
QEEVSRIINYNVEQECNNFLRTKIQDWQSMYQSTHIPIPKFAPVDESITFIGRLCREILRITDPKMTCYI
DQLNTWYDVKTHQEVTSSRLFSEIQTTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKIILKERTVQETLK
MLMSAVNPLKSIVANSSKVYLSAITKTQKIWSAYLEAIMKVGQMQILRQQIANELNSSCRFDSRHLAAAL
DNLNKALLADIEAHYRDPSLPYPKEDNTLLYEITAYLEAAGIHNPLNKIYITTKRLPYFPIVNFLFLIAQ
LPKLQYNKNLGMVCRKPADPVDWPPLVLGLLTLLKQFHSRYTEQFLALIGQFIRSTMEQCTSQKMPEMPA
DAVGALLFLEDYVRYTKLPRRVAEAHVPNFIFDEFRTVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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