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Report for CCDS39655.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39655.1 Public Mus musculus 6 Klrb1b 23 108 98 CCDS HistoryNCBI Gene:80782Re-query CCDS DB by CCDS ID:39655.1Re-query CCDS DB by GeneID:80782See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39655.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032472.10 ENSMUSP00000032472.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032472.10Link to Ensembl Protein Viewer:ENSMUSP00000032472.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000032472Re-query CCDS DB by Protein ID:ENSMUSP00000032472
Original member Current member NCBI NM_030599.4 NP_085102.4 Accepted alive Link to Nucleotide Sequence:NM_030599.4Link to Protein Sequence:NP_085102.4Re-query CCDS DB by Nucleotide ID:NM_030599Re-query CCDS DB by Protein ID:NP_085102Link to BLAST:NP_085102.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_085102.4 223 Q99JB4 223 100% 0 0

Chromosomal Locations for CCDS 39655.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 128815177 128815318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128818473 128818588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128818913 128819067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128820265 128820336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128820942 128821040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128826159 128826246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGGATTCAACAACACTGGTCTATGCAGATTTAAACCTAGCCAGGATCCAAGAACCTAAGCATGATTCAC
CTCCATCTCTTTCCCCAGACACCTGTCGGTGCCCTCGCTGGCATCGGTTGGCTCTGAAATTTGGCTGTGC
TGGCCTCATCCTTCTTGTGCTGGTCGTGATTGGACTCTGTGTCTTGGTGCTATCAGTACAAAAATCATCA
GTACAAAAAATCTGCGCGGATGTTCAAGAGAACAGAACACATACAACAGGTTGTTCAGCTAAGCTAGAGT
GCCCACAAGACTGGCTTTCACACCGAGATAAGTGCTTTCACGTTTCTCAAGTTTCCAACACTTGGAAGGA
ATGTCGAATTGATTGTGATAAAAAAGGAGCCACTTTGCTGCTCATTCAAGACCAAGAAGAACTGAGATTC
CTACTGGACTCAATAAAGGAAAAATACAATTCATTTTGGATTGGACTAAGTTACACATTAACAGACATGA
ACTGGAAGTGGATAAATGGCACAGCTTTCAATTCTGATGTACTAAAAATCACTGGTGTCACTGAAAATGG
CAGCTGTGCCGCCATCTCAGGAGAAAAAGTGACTTCTGAGGGCTGTTCTTCAGACAACCGTTGGATCTGC
CAAAAGGAACTAAACCATGAAACCCCGTGTAATGACTCCTGA

Translation (223 aa):
MDSTTLVYADLNLARIQEPKHDSPPSLSPDTCRCPRWHRLALKFGCAGLILLVLVVIGLCVLVLSVQKSS
VQKICADVQENRTHTTGCSAKLECPQDWLSHRDKCFHVSQVSNTWKECRIDCDKKGATLLLIQDQEELRF
LLDSIKEKYNSFWIGLSYTLTDMNWKWINGTAFNSDVLKITGVTENGSCAAISGEKVTSEGCSSDNRWIC
QKELNHETPCNDS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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