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Report for CCDS18036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18036.1 Public Mus musculus 4 Mob3b 23 108 98 CCDS HistoryNCBI Gene:214944Re-query CCDS DB by CCDS ID:18036.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18036.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102975.9 ENSMUSP00000100040.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102975.9Link to Ensembl Protein Viewer:ENSMUSP00000100040.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102975Re-query CCDS DB by Protein ID:ENSMUSP00000100040
Original member Current member NCBI NM_178061.5 NP_835162.1 Accepted alive Link to Nucleotide Sequence:NM_178061.5Link to Protein Sequence:NP_835162.1Re-query CCDS DB by Nucleotide ID:NM_178061Re-query CCDS DB by Protein ID:NP_835162Link to BLAST:NP_835162.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835162.1 216 Q8VE04 216 100% 0 0

Chromosomal Locations for CCDS 18036.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 34954018 34954047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 34985916 34986118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 35083770 35084187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGTCCATCGCCCTGAAGCAAGTGTTCAACAAGGACAAGACCTTCAGGCCCAAGAGGAAGTTTGAACCCG
GCACACAGAGATTTGAGCTGCACAAACGGGCTCAGGCGTCCCTCAACTCGGGTGTGGACCTGAGGGCAGC
CGTGCAGTTACCCAACGGGGAGGACCAGAACGACTGGGTGGCTGTGCACGTGGTGGACTTCTTCAATCGC
ATTAACCTCATCTACGGCACCATCTGTGAGTTCTGCACTGAGCGGACCTGTCCTGTGATGTCAGGGGGCC
CCAAATACGAGTACCGATGGCAGGATGACCTCAAGTATAAGAAACCAACTGCACTGCCCGCTCCCCAGTA
CATGAATCTGCTTATGGATTGGATTGAAGTCCAGATAAACAATGAGGACATATTTCCAACATGTGTTGGC
GTCCCCTTCCCAAAGAACTTCCTCCAGATCTGCAAGAAGATCCTGTGCCGCCTCTTTCGGGTCTTCGTCC
ATGTCTACATTCATCACTTTGACCGTGTCATTGTGATGGGCGCAGAGGCTCACGTCAACACCTGCTACAA
ACACTTCTATTACTTCGTCACAGAGATGAACCTCATAGACCGCAAGGAGCTGGAGCCCTTGAAAGAGATG
ACAACCAGGATGTGTCACTAA

Translation (216 aa):
MSIALKQVFNKDKTFRPKRKFEPGTQRFELHKRAQASLNSGVDLRAAVQLPNGEDQNDWVAVHVVDFFNR
INLIYGTICEFCTERTCPVMSGGPKYEYRWQDDLKYKKPTALPAPQYMNLLMDWIEVQINNEDIFPTCVG
VPFPKNFLQICKKILCRLFRVFVHVYIHHFDRVIVMGAEAHVNTCYKHFYYFVTEMNLIDRKELEPLKEM
TTRMCH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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