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Report for CCDS59589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59589.1 Public Mus musculus 13 Zfp748 23 108 98 CCDS HistoryNCBI Gene:212276Re-query CCDS DB by CCDS ID:59589.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59589.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000181892.8 ENSMUSP00000137928.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000181892.8Link to Ensembl Protein Viewer:ENSMUSP00000137928.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000181892Re-query CCDS DB by Protein ID:ENSMUSP00000137928
Original member NCBI NM_001035231.3 NP_001030308.1 Updated not alive Link to Nucleotide Sequence:NM_001035231.3Link to Protein Sequence:NP_001030308.1Re-query CCDS DB by Nucleotide ID:NM_001035231Re-query CCDS DB by Protein ID:NP_001030308
Current member NCBI NM_001035231.4 NP_001030308.1 Accepted alive Link to Nucleotide Sequence:NM_001035231.4Link to Protein Sequence:NP_001030308.1Re-query CCDS DB by Nucleotide ID:NM_001035231Re-query CCDS DB by Protein ID:NP_001030308Link to BLAST:NP_001030308.1

Chromosomal Locations for CCDS 59589.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67540473 67542910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67545324 67545419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67546625 67546751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67553031 67553036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2667 nt):
ATGGAGGAAATGCTGTCATTCAGGGATGTGGCCGTTGATTTCTCTGCAGAGGAGTGGGAGTGCCTGGAGC
CTGCTCAGTGGAATCTGTACAGGGACGTGATGCTGGAGAATTACAGCCACCTTGTGTTCCTGGGTCTTGC
TTTCTCTAAGCCATACCTGGTCACGTTTCTGGAGCAAAGACAAGAGCCTTTGAATGAGAAGAGACAAGTG
GCCACCACCATGCACCCAGATATAAAACCATATAAATGTAAAGAATGTGGCAAAGCCTGTGATTGGAACT
CACTCCTTCTCGAACACCAGAGAACCAATCCAGGAGAGAATGCCTACAAGTGTGAAGAATGTGGTCAGGC
TTCTGGCTCTTACTCAGTAATTCCTGAACACCATATAAACGATACGGAAGAGAAAGCCTGCAAGTGTGAA
GAATGTGGTAAAGTCATTTGTACTTGCTCAGAAAATTCTAGCTACCAGAGAATTTGCATTGGAGAAAACC
CCTACAAGTGTGAAGAATGTGGAAAAGCCTTTTCTTCTCATTCATGTCTTGCTCAACATGAGGTAGAACA
CACTGGACAGCAATTTTATAACTGTGAAGAATGTGGGAAACTGTTTTATTGTCCTTCTCACCTTACAGAA
CATCAAAAAATTCATTCTCAAGAGAATCTCTTTAAGATTGAGGTATGTAGCGAGGTCTTTTGTGCTCCCA
TAGAACTTTCTAAAGACCAGAACTTTTGTACTGAAGAAAAACCCTACAGGTATGAAGACTATGTTAAGGC
CTTTAGCGCTTGCTCAGTTCTTTCTGAACACCCGACAATTCATCCAGGAGAGAAAGCATTCAAGTGTGAA
GAATGTGGCAATGCCTTTTGTACACTCCATTCAGTCTCTAAAATGAAAATTCATTATGAAGTGAAATCCT
ACAAGTGTGAAGAGTGTGGGAAAGCCTTTGCTACTCATCTTTCCCTGATTCAGCATAAGATAGGTCATAC
TCGAGAGAAACCTTATCAATGTGAAGAATGTGGCAAAATGTTTTACTGTTCTTCAAACCTTAAGCAACAT
CAAATAACTCATTCTCAAGAGAAACCCTACAAGTGTGAAGTATGTGGCAAGGTCTTTAGAACTTGCTGGC
AACTTTCTAAACACCTGAGAATCCATTCTGGAGAGAAACCATACAAGTGTGAGGAATGTGGCAAAGCCTT
TTATACTCTCTCCTACCTTACTCAGCACAAATTAGGTCACACTGGGGAGAAACCTTACAAATGTGAGGAA
TGTGGCAAAACCTTTTACTACCCTTCAGTCCTTAAGGAACACCTAGCAATTCATTCTGGAGAGAAACCGT
ACAGGTGTGATGAATGTGGCAAGGACTTTTGTACTCGCTCAGGACGTTCCAGACACCAGAGAATCCATAC
TGGAGAGAAACCGTACAAGTGTGAGCAATGTGGAAAGGCCTTCAGTACCCATTCATACCTTTCTCATCAC
AAGATAGTTCACACTGGACATAAACCCTACAAGTGTGAAGAGTGTGGCAAAAAATTTTATTATCCTTCTC
GACTTAAGGAGCATCAAAGGATTCATTCTCAAGAGAATCCCTACAAGTGTGAAATATGTGGCAAAGCCTT
TTATACTCACTCATACTTTACCCAGCACAAATTAGGTCACACTGGGGAGAAACCTTACAAATGTGAGGAA
TGTGGCAAAACCTTTTACTACCCTTCAATCCTTAAGGAACACCTAGCAATTCATTCTGGAAAGAAACCGT
ACAGGTGTGAAGAATGTGGCAAGGACTTTTGTACTCGCTCAGGACGTTCCAGACACCAAAGAATCCATAC
TGGAGAGAAACCCCACAAGTGTGAAGAATGCGGAAAAGTCTTTTCTACTCATTCATATCTTACTCAGCAC
AAAGTAGTCCACTCTGGAGAGAAGCCCTACAAGTGTGAAGAGTGTGGCAAAAAGTTTTACTATCCTTCTC
GCCTTAAGGAGCATCAAAGGATTCATTCTCAAGAGAATCCTTACAAGTGTGAAATATGTGGCAATGTATT
TTGTACTCCCAAAGGACTTTCGAAACACCAGAGATTTCATACTGGAGAGAAACCCTACAAGTGTGAAGAA
TGCGGGAAAATGTTTTATTATCCTTCTCGACTTAAGGAACATCAAAGAATTCATTCTCAAGAGAATCCTT
ACAAGTGTGAAATATGTGGCAAAGCCTTTTATACTCACTCCTACCTTACTCAGCACAAATTAGGTCATAC
TGGGGAGAAACCTTACAAATGTGAGGAATGTGGCAAAACCTTTTACTACCCTTCAATCCTTAAGGAACAC
CTAGCAATTCATTCTGGAAAGAAACCGTACAGGTGTGAAGAATGTGGCAAGGACTTTTGTACTCGCTCAG
GACGTTCCAGACACCAGAGAATCCATACTGGAGAGAAACCCTACAAGTGTGAGCAATGTGGAAAGGCCTT
CAGTACTCACTCATACCTTTCTCAACACAAGGTAGTCCACTCTGGAGAGAAGCCCTACAAGTGTGAAGAG
TGTGGCAAAATGTTTTACTATTCTTCTCGACTTAAGGAGCATCAAAGGATTCATTCTCAAGAGAATCCCT
ACAAGTGTGAAGTGTGTGGCAAAGTCTTTAGTGCTCACTTAGAACTTGCTACCCACCTAAGTATTCATTC
CGGATAA

Translation (888 aa):
MEEMLSFRDVAVDFSAEEWECLEPAQWNLYRDVMLENYSHLVFLGLAFSKPYLVTFLEQRQEPLNEKRQV
ATTMHPDIKPYKCKECGKACDWNSLLLEHQRTNPGENAYKCEECGQASGSYSVIPEHHINDTEEKACKCE
ECGKVICTCSENSSYQRICIGENPYKCEECGKAFSSHSCLAQHEVEHTGQQFYNCEECGKLFYCPSHLTE
HQKIHSQENLFKIEVCSEVFCAPIELSKDQNFCTEEKPYRYEDYVKAFSACSVLSEHPTIHPGEKAFKCE
ECGNAFCTLHSVSKMKIHYEVKSYKCEECGKAFATHLSLIQHKIGHTREKPYQCEECGKMFYCSSNLKQH
QITHSQEKPYKCEVCGKVFRTCWQLSKHLRIHSGEKPYKCEECGKAFYTLSYLTQHKLGHTGEKPYKCEE
CGKTFYYPSVLKEHLAIHSGEKPYRCDECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSHH
KIVHTGHKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCEICGKAFYTHSYFTQHKLGHTGEKPYKCEE
CGKTFYYPSILKEHLAIHSGKKPYRCEECGKDFCTRSGRSRHQRIHTGEKPHKCEECGKVFSTHSYLTQH
KVVHSGEKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCEICGNVFCTPKGLSKHQRFHTGEKPYKCEE
CGKMFYYPSRLKEHQRIHSQENPYKCEICGKAFYTHSYLTQHKLGHTGEKPYKCEECGKTFYYPSILKEH
LAIHSGKKPYRCEECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSQHKVVHSGEKPYKCEE
CGKMFYYSSRLKEHQRIHSQENPYKCEVCGKVFSAHLELATHLSIHSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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