CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS50803.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
50803.1 |
Public |
Mus musculus |
2 |
Nfatc2 |
23 |
108 |
98 |
|
Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 50803.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000109184.7 |
ENSMUSP00000104812.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001136073.2 |
NP_001129545.1 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001129545.1 |
923 |
Q60591-2 |
923 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 50803.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2772 nt): ATGGACGTCCCGGAGCCGCAGCCCGACCCCGATGGCGGGGACGGCCCCGGCCACGAGCCCGGGGGCAGTC CCCAAGACGAGCTGGACTTTTCCATCCTCTTCGATTATGACTATCTGAACCCTATCGAAGAAGAACCGAT CGCACATAAGGCCATCAGCTCACCCTCCGGACTCGCATACCCGGATGATGTCCTGGACTATGGCCTCAAG CCATGCAACCCCCTTGCCAGTCTCTCTGGCGAGCCCCCTGGCCGGTTCGGAGAGCCGGATAGTATAGGGT TCCAGAACTTTCTGAGCCCGGTCAAGCCAGCAGGGGCTTCGGGCCCGAGCCCTCGGATCGAGATCACTCC ATCCCACGAACTGATGCAGGCAGGGGGGGCCCTCCGTGGGAGAGACGCCGGCCTGTCCCCCGAGCAGCCG GCCCTGGCCCTGGCCGGCGTGGCCGCCAGCCCGAGGTTCACACTGCCCGTGCCCGGCTACGAGGGCTACC GCGAGCCGCTTTGCTTGAGCCCCGCTAGCAGCGGCTCCTCTGCCAGCTTCATTTCTGACACCTTCTCCCC CTACACCTCGCCCTGCGTCTCACCCAATAACGCCGGGCCCGACGACCTGTGTCCCCAGTTTCAAAACATC CCTGCTCATTATTCCCCCAGAACCTCTCCAATAATGTCACCTCGAACCAGCCTCGCCGAGGACAGCTGCC TGGGCCGACACTCGCCCGTGCCCCGTCCGGCATCCCGCTCCTCCTCACCCGGTGCCAAGCGGAGGCATTC GTGCGCAGAGGCTTTGGTTGCTCCTCTGCCCGCAGCCTCACCCCAGCGCTCCCGGAGCCCCTCGCCACAG CCCTCGCCTCACGTGGCACTGCAGGACGACAGCATCCCCGCTGGGTACCCCCCCACGGCCGGCTCTGCTG TTCTCATGGATGCCCTCAACACCCTGGCCACCGACTCGCCCTGCGGGATCCCCTCCAAGATATGGAAGAC CAGTCCTGACCCGACGCCTGTGTCCACCGCTCCGTCCAAGGCTGGCCTGGCCCGCCACATCTACCCTACT GTGGAGTTCCTGGGGCCATGTGAGCAGGAGGAGAGGAGGAATTCCGCTCCAGAGTCCATCCTGCTGGTAC CACCTACTTGGCCCAAGCAGTTGGTGCCGGCCATTCCCATCTGCAGCATCCCTGTGACTGCATCCCTCCC ACCACTCGAGTGGCCACTCTCCAATCAGTCGGGCTCCTATGAGCTACGGATTGAGGTCCAACCCAAGCCC CATCACCGGGCCCACTATGAGACGGAGGGCAGCCGTGGCGCTGTCAAAGCCCCAACAGGAGGACACCCTG TGGTGCAGCTCCACGGCTACATGGAGAACAAGCCTCTGGGGCTTCAGATCTTCATTGGGACAGCAGATGA GAGGATCCTTAAGCCGCACGCCTTCTACCAAGTACACAGGATCACTGGGAAAACGGTCACCACCACGAGC TATGAGAAGATCGTAGGCAACACCAAGGTCCTGGAGATCCCCCTGGAGCCAAAGAACAACATGAGAGCCA CCATCGACTGTGCAGGCATCCTGAAGCTCCGAAACGCTGACATCGAGCTGCGGAAGGGCGAGACGGACAT CGGCAGGAAGAACACGCGTGTGCGCCTGGTGTTCCGCGTGCACGTCCCAGAGCCCAGTGGGCGCATCGTC TCCCTGCAGGCTGCGTCCAACCCCATCGAGTGCTCTCAGCGCTCTGCCCACGAGCTGCCCATGGTGGAGA GACAAGACATGGACAGCTGCCTGGTCTACGGGGGCCAGCAGATGATCCTCACGGGCCAGAACTTCACAGC GGAGTCCAAGGTTGTGTTCATGGAGAAGACTACAGATGGGCAGCAGATTTGGGAGATGGAAGCTACGGTG GATAAAGACAAGAGCCAGCCTAACATGCTTTTTGTTGAGATCCCCGAGTATCGGAACAAGCACATCCGCG TGCCCGTGAAAGTCAACTTCTACGTCATCAACGGAAAGAGGAAACGAAGTCAGCCACAGCACTTTACCTA CCACCCAGTCCCTGCCATCAAGACAGAGCCCAGCGATGAGTATGAACCATCTTTGATCTGCAGCCCCGCC CATGGAGGCCTGGGGAGCCAGCCATATTACCCACAGCACCCAATGCTGGCCGAGTCCCCCTCCTGCCTTG TGGCTACCATGGCCCCCTGCCAACAGTTCCGCTCGGGGCTCTCATCCCCCGATGCTCGCTACCAACAGCA GAGCCCCGCAGCTGCCCTCTACCAGAGAAGCAAGAGCCTGAGTCCCGGCCTGCTGGGCTACCAGCAGCCG TCCCTCCTGGCAGCACCCTTGGGTCTGGCTGATGCCCACCGCTCTGTGCTGGTGCATGCTGGTTCTCAGG GGCAGGGGCAGGGCTCCACCCTGCCACACACATCCTCGGCCAGCCAGCAGGCCTCACCCGTGATCCACTA CTCACCCACCAACCAGCAGCTTCGCGGTGGGGGTCACCAGGAGTTCCAGCATATCATGTACTGTGAAAAC TTCGGCCCCAGCTCTGCCAGGCCTGGCCCGCCTCCCATCAACCAAGGTCAGAGGCTGAGCCCGGGCGCCT ACCCCACAGTCATCCAACAACAGACTGCCCCGAGCCAAAGAGCTGCCAAAAACGGACCCAGTGACCAGAA GGAAGCTCTGCCCACGGGAGTGACCGTCAAACAGGAACAGAACCTGGACCAGACCTACCTGGATGACGAG TTGATAGACACACACCTTAGCTGGATACAAAACATATTATGA
Translation (923 aa): MDVPEPQPDPDGGDGPGHEPGGSPQDELDFSILFDYDYLNPIEEEPIAHKAISSPSGLAYPDDVLDYGLK PCNPLASLSGEPPGRFGEPDSIGFQNFLSPVKPAGASGPSPRIEITPSHELMQAGGALRGRDAGLSPEQP ALALAGVAASPRFTLPVPGYEGYREPLCLSPASSGSSASFISDTFSPYTSPCVSPNNAGPDDLCPQFQNI PAHYSPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAEALVAPLPAASPQRSRSPSPQ PSPHVALQDDSIPAGYPPTAGSAVLMDALNTLATDSPCGIPSKIWKTSPDPTPVSTAPSKAGLARHIYPT VEFLGPCEQEERRNSAPESILLVPPTWPKQLVPAIPICSIPVTASLPPLEWPLSNQSGSYELRIEVQPKP HHRAHYETEGSRGAVKAPTGGHPVVQLHGYMENKPLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTS YEKIVGNTKVLEIPLEPKNNMRATIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHVPEPSGRIV SLQAASNPIECSQRSAHELPMVERQDMDSCLVYGGQQMILTGQNFTAESKVVFMEKTTDGQQIWEMEATV DKDKSQPNMLFVEIPEYRNKHIRVPVKVNFYVINGKRKRSQPQHFTYHPVPAIKTEPSDEYEPSLICSPA HGGLGSQPYYPQHPMLAESPSCLVATMAPCQQFRSGLSSPDARYQQQSPAAALYQRSKSLSPGLLGYQQP SLLAAPLGLADAHRSVLVHAGSQGQGQGSTLPHTSSASQQASPVIHYSPTNQQLRGGGHQEFQHIMYCEN FGPSSARPGPPPINQGQRLSPGAYPTVIQQQTAPSQRAAKNGPSDQKEALPTGVTVKQEQNLDQTYLDDE LIDTHLSWIQNIL
|