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Report for CCDS2461.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2461.1 Public Homo sapiens 2 FAM124B 24 110 108 CCDS HistoryNCBI Gene:79843Re-query CCDS DB by CCDS ID:2461.1Re-query CCDS DB by GeneID:79843See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2461.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000243806.2 ENSP00000243806.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000243806.2Link to Ensembl Protein Viewer:ENSP00000243806.2Re-query CCDS DB by Nucleotide ID:ENST00000243806Re-query CCDS DB by Protein ID:ENSP00000243806
Original member Current member EBI ENST00000389874.3 ENSP00000374524.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000389874.3Link to Ensembl Protein Viewer:ENSP00000374524.3Re-query CCDS DB by Nucleotide ID:ENST00000389874Re-query CCDS DB by Protein ID:ENSP00000374524
Original member Current member NCBI NM_024785.3 NP_079061.2 Accepted alive Link to Nucleotide Sequence:NM_024785.3Link to Protein Sequence:NP_079061.2Re-query CCDS DB by Nucleotide ID:NM_024785Re-query CCDS DB by Protein ID:NP_079061Link to BLAST:NP_079061.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079061.2 272 Q9H5Z6-2 272 100% 0 0

Chromosomal Locations for CCDS 2461.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 224400419 224400505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 224401037 224401768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGGATGAGACACAGGGGCCTCTGGCCATGACTGTCCATCTTCTTGCCAACTCTGGGCACGGCTCCCTTC
TGCAGAGGACTCTGGACCAGCTCCTGGATTGCATTTGCCCAGAGGTCCGGCTCTTTCAGGTGTCTGAACG
GGCCAGTCCTGTGAAATACTGTGAAAAGTCCCATTCCAAGCGGTCCCGGTTTCCAGGGATGTCCGTGTTG
CTCTTCCTGCACGAAAGCCCGGGAGAGGATAGGCTATTTCGCGTCCTGGACTCTCTCCAGCATTCGCCAT
GGCAGTGCTACCCCACCCAGGACACTCGGGGAAGGCTGTGTCCCTACTTTTTTGCCAATCAGGAGTTCTA
CAGCCTGGACAGTCAGCTGCCCATCTGGGGGGTGAGGCAGGTGCACTGTGGCTCCGAGATCCTGAGGGTG
ACGCTGTACTGCAGTTTTGATAACTATGAAGACGCCATCAGACTCTACGAGATGATCCTGCAGAGAGAAG
CGACCTTGCAAAAGAGCAATTTTTGTTTCTTCGTGCTCTATGCCTCCAAGAGCTTTGCTCTGCAGCTCTC
CCTGAAGCAGCTGCCCCCGGGAATGTCAGTGGACCCCAAAGAGTCTTCGGTGCTGCAGTTTAAGGTTCAA
GAGATCGGCCAGTTAGTGCCTCTGCTACCCAATCCATGCATGCCTATCAGCAGCACCAGGTGGCAGACTC
AGGACTACGATGGCAACAAGATTCTGCTTCAGAGATGGGAGTCTTCCTCTGTTGCCCAGACTCGAGTGCG
GTGGTGCCATCATAGCTCCCTGAGGTCTTCACCTTCTGGGTTCAAGTGA

Translation (272 aa):
MDETQGPLAMTVHLLANSGHGSLLQRTLDQLLDCICPEVRLFQVSERASPVKYCEKSHSKRSRFPGMSVL
LFLHESPGEDRLFRVLDSLQHSPWQCYPTQDTRGRLCPYFFANQEFYSLDSQLPIWGVRQVHCGSEILRV
TLYCSFDNYEDAIRLYEMILQREATLQKSNFCFFVLYASKSFALQLSLKQLPPGMSVDPKESSVLQFKVQ
EIGQLVPLLPNPCMPISSTRWQTQDYDGNKILLQRWESSSVAQTRVRWCHHSSLRSSPSGFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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