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Report for CCDS9120.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9120.1 Public Homo sapiens 12 CORO1C 24 110 108 CCDS HistoryNCBI Gene:23603Re-query CCDS DB by CCDS ID:9120.1Re-query CCDS DB by GeneID:23603See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9120.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261401.8 ENSP00000261401.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261401.8Link to Ensembl Protein Viewer:ENSP00000261401.3Re-query CCDS DB by Nucleotide ID:ENST00000261401Re-query CCDS DB by Protein ID:ENSP00000261401
Original member Current member EBI ENST00000541050.5 ENSP00000438341.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541050.5Link to Ensembl Protein Viewer:ENSP00000438341.1Re-query CCDS DB by Nucleotide ID:ENST00000541050Re-query CCDS DB by Protein ID:ENSP00000438341
Original member Current member NCBI NM_001276471.2 NP_001263400.1 Accepted alive Link to Nucleotide Sequence:NM_001276471.2Link to Protein Sequence:NP_001263400.1Re-query CCDS DB by Nucleotide ID:NM_001276471Re-query CCDS DB by Protein ID:NP_001263400Link to BLAST:NP_001263400.1
Original member Current member NCBI NM_014325.4 NP_055140.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014325.4Link to Protein Sequence:NP_055140.1Re-query CCDS DB by Nucleotide ID:NM_014325Re-query CCDS DB by Protein ID:NP_055140Link to BLAST:NP_055140.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263400.1 474 Q9ULV4-1 474 100% 0 0
NP_055140.1 474 Q9ULV4-1 474 100% 0 0

Chromosomal Locations for CCDS 9120.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 108647403 108647522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108648605 108648850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108648963 108649020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108652272 108652417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108654306 108654410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108657304 108657423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108658738 108658919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108662029 108662158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108678272 108678394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 108701124 108701318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGAGGCGAGTGGTACGACAGAGCAAGTTTCGGCATGTATTTGGGCAAGCGGTGAAAAATGACCAGTGCT
ATGATGACATCCGGGTTTCTCGTGTGACCTGGGATAGTTCCTTTTGTGCTGTCAATCCCAGATTTGTTGC
CATAATCATAGAGGCAAGTGGGGGAGGAGCGTTCCTTGTCCTCCCTCTGCACAAGACTGGTCGAATTGAC
AAATCTTACCCTACAGTATGTGGCCACACAGGACCAGTGCTGGACATAGACTGGTGCCCACATAACGATC
AGGTCATTGCCAGCGGTTCAGAGGACTGCACGGTCATGGTATGGCAGATCCCAGAAAATGGACTCACCCT
TTCCCTGACTGAACCTGTGGTGATTTTGGAAGGCCACTCAAAGAGAGTCGGCATCGTGGCTTGGCATCCA
ACGGCCCGCAATGTGCTTCTTAGTGCAGGCTGTGATAATGCCATTATCATCTGGAATGTGGGAACAGGGG
AAGCCCTTATAAACTTGGACGATATGCATTCAGACATGATTTACAATGTGAGCTGGAACCGGAATGGCAG
TCTGATCTGCACAGCTTCCAAAGACAAGAAAGTGAGAGTCATTGATCCCAGGAAACAAGAGATTGTTGCT
GAGAAGGAGAAAGCACATGAAGGAGCAAGACCCATGAGAGCCATCTTCCTGGCCGATGGCAATGTCTTCA
CCACTGGGTTCAGCCGCATGAGCGAGCGGCAGCTGGCTCTCTGGAATCCGAAAAATATGCAGGAACCAAT
TGCTCTTCATGAGATGGACACTAGCAATGGGGTGTTGCTGCCTTTCTATGACCCTGACACCAGCATCATT
TACTTATGTGGAAAGGGTGACAGCAGTATTCGCTATTTTGAGATCACGGATGAATCCCCGTACGTCCACT
ACCTCAACACATTCAGCAGCAAGGAGCCTCAGAGAGGGATGGGTTACATGCCCAAGAGGGGACTTGATGT
TAACAAATGTGAGATTGCCAGATTCTTCAAACTTCATGAGAGAAAGTGTGAACCTATTATTATGACTGTT
CCCAGGAAGTCTGACCTTTTCCAAGATGACCTGTATCCTGACACAGCGGGGCCAGAGGCCGCGCTGGAGG
CAGAAGAGTGGTTCGAAGGCAAGAATGCAGACCCAATCCTCATCTCCTTGAAGCACGGGTACATTCCAGG
CAAAAACAGGGATCTCAAGGTGGTCAAGAAGAACATTCTGGATAGCAAGCCCACTGCAAACAAGAAGTGC
GACCTGATCAGCATCCCCAAGAAAACCACAGACACGGCCAGTGTGCAAAATGAAGCCAAGTTGGATGAGA
TTTTAAAAGAGATCAAATCTATAAAAGACACAATCTGCAATCAAGATGAGCGTATTTCCAAGTTAGAACA
GCAGATGGCAAAGATAGCAGCCTGA

Translation (474 aa):
MRRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKTGRID
KSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEGHSKRVGIVAWHP
TARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRNGSLICTASKDKKVRVIDPRKQEIVA
EKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSII
YLCGKGDSSIRYFEITDESPYVHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERKCEPIIMTV
PRKSDLFQDDLYPDTAGPEAALEAEEWFEGKNADPILISLKHGYIPGKNRDLKVVKKNILDSKPTANKKC
DLISIPKKTTDTASVQNEAKLDEILKEIKSIKDTICNQDERISKLEQQMAKIAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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