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Report for CCDS37167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37167.1 Public Mus musculus 15 Parvb 23 108 98 CCDS HistoryNCBI Gene:170736Re-query CCDS DB by CCDS ID:37167.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37167.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023072.6 ENSMUSP00000023072.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023072.6Link to Ensembl Protein Viewer:ENSMUSP00000023072.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000023072Re-query CCDS DB by Protein ID:ENSMUSP00000023072
Original member Current member NCBI NM_133167.3 NP_573395.1 Accepted alive Link to Nucleotide Sequence:NM_133167.3Link to Protein Sequence:NP_573395.1Re-query CCDS DB by Nucleotide ID:NM_133167Re-query CCDS DB by Protein ID:NP_573395Link to BLAST:NP_573395.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_573395.1 365 Q9ES46 365 100% 0 0

Chromosomal Locations for CCDS 37167.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84232072 84232186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84271231 84271320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84273499 84273569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84282762 84282864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84290387 84290527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84292782 84292897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84295557 84295615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84297966 84297985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84303408 84303469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84303835 84303903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84308853 84308954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84312703 84312775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84312955 84313031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1098 nt):
ATGTCCTCCGCGCCACCACGGTCGCCCACCCCGCGGGCCCCCAAGATGAAGAAGGACGAGTCTTTCTTGG
GCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGTGACTGACTTACAGGAAGAAGGCAA
GAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGTGGACATTCACCCTGAAGACACCCAGCTAGAGGAG
AATGAGGAGCGTACCATGATCGATCCCACCTCTAGAGAAGACCCCAAGTTCAAGGAGTTGGTCAAGGTAC
TTCTGGACTGGATCAACGATGTGCTGGCAGAGGAGCGCATCATTGTGAAGCAGCTGGAGGAGGACCTGTA
CGATGGCCAGGTGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACG
CAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCCCC
ATGGCTGGCCGCTGCGTTGGAATGTGGACTCTATCCATGGGAAGAACCTAGTGGCCATTCTGCATCTCCT
CGTCTCCCTGGCCATGCACTTCAGGGCCCCCATTCACCTTCCTGAGCATGTCACCGTGCAGGTGGTGGTC
GTTCGGAAGCGAGAAGGCTTGCTGCACTCCAGCCACATCTCAGAGGAGCTGACCACGACCACAGAGATCA
TGATGGGCCGGTTTGAGCGGGACGCCTTCGATACTCTTTTCGACCACGCCCCGGACAAGCTCAACCTTGT
GAAGAAGTCTCTCATCACGTTTGTGAACAAACACCTGAATAAGCTAAACTTGGAGGTGACTGACCTGGAG
ACCCAGTTTGCAGATGGTGTGTACCTAGTTCTACTTCTGGGCCTTCTTGAAGACTACTTTGTCCCCCTTC
ACAACTTCTACCTGACTCCTGACAGCTTTGACCAGAAGGTGCACAACGTGGCCTTTGCCTTTGAACTGAT
GCTGGATGGAGGCCTCAAGAAGCCCAAGGCACGCCCTGAAGATGTGGTGAACTTGGACCTCAAGTCCACT
CTGCGGGTCCTTTACACGCTGTTCACCAAGTACAAGGATGTGGAGTGA

Translation (365 aa):
MSSAPPRSPTPRAPKMKKDESFLGKLGGTLARKKKTREVTDLQEEGKSAINSPMAPALVDIHPEDTQLEE
NEERTMIDPTSREDPKFKELVKVLLDWINDVLAEERIIVKQLEEDLYDGQVLQKLLEKLAHCKLNVAEVT
QSEIGQKQKLQTVLEAVQDLLRPHGWPLRWNVDSIHGKNLVAILHLLVSLAMHFRAPIHLPEHVTVQVVV
VRKREGLLHSSHISEELTTTTEIMMGRFERDAFDTLFDHAPDKLNLVKKSLITFVNKHLNKLNLEVTDLE
TQFADGVYLVLLLGLLEDYFVPLHNFYLTPDSFDQKVHNVAFAFELMLDGGLKKPKARPEDVVNLDLKST
LRVLYTLFTKYKDVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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