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Report for CCDS7738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7738.1 Public Homo sapiens 11 CDKN1C 24 110 108 CCDS HistoryNCBI Gene:1028Re-query CCDS DB by CCDS ID:7738.1Re-query CCDS DB by GeneID:1028See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000430149.3 ENSP00000411552.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430149.3Link to Ensembl Protein Viewer:ENSP00000411552.2Re-query CCDS DB by Nucleotide ID:ENST00000430149Re-query CCDS DB by Protein ID:ENSP00000411552
Original member Current member EBI ENST00000414822.8 ENSP00000413720.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414822.8Link to Ensembl Protein Viewer:ENSP00000413720.3Re-query CCDS DB by Nucleotide ID:ENST00000414822Re-query CCDS DB by Protein ID:ENSP00000413720
Original member Current member NCBI NM_000076.2 NP_000067.1 Accepted alive Link to Nucleotide Sequence:NM_000076.2Link to Protein Sequence:NP_000067.1Re-query CCDS DB by Nucleotide ID:NM_000076Re-query CCDS DB by Protein ID:NP_000067Link to BLAST:NP_000067.1
Original member Current member NCBI NM_001362474.2 NP_001349403.1 Accepted alive Link to Nucleotide Sequence:NM_001362474.2Link to Protein Sequence:NP_001349403.1Re-query CCDS DB by Nucleotide ID:NM_001362474Re-query CCDS DB by Protein ID:NP_001349403Link to BLAST:NP_001349403.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000067.1 316 P49918-1 316 100% 0 0
NP_001349403.1 316 P49918-1 316 100% 0 0

Chromosomal Locations for CCDS 7738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 2884004 2884134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 2884670 2885489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGTCCGACGCGTCCCTCCGCAGCACATCCACGATGGAGCGTCTTGTCGCCCGTGGGACCTTCCCAGTAC
TAGTGCGCACCAGCGCCTGCCGCAGCCTCTTCGGGCCGGTGGACCACGAGGAGCTGAGCCGCGAGCTGCA
GGCCCGCCTGGCCGAGCTGAACGCCGAGGACCAGAACCGCTGGGATTACGACTTCCAGCAGGACATGCCG
CTGCGGGGCCCTGGACGCCTGCAGTGGACCGAAGTGGACAGCGACTCGGTGCCCGCGTTCTACCGCGAGA
CGGTGCAGGTGGGGCGCTGCCGCCTGCTGCTGGCGCCGCGGCCCGTCGCGGTCGCGGTGGCTGTCAGCCC
GCCCCTCGAGCCGGCCGCTGAGTCCCTCGACGGCCTCGAGGAGGCGCCGGAGCAGCTGCCTAGTGTCCCG
GTCCCGGCCCCGGCGTCCACCCCGCCCCCAGTCCCGGTCCTGGCTCCAGCCCCGGCCCCGGCTCCGGCTC
CGGTCGCGGCTCCGGTCGCGGCTCCGGTCGCGGTCGCGGTCCTGGCCCCGGCCCCGGCCCCGGCTCCGGC
TCCGGCTCCGGCCCCGGCTCCAGTCGCGGCCCCGGCCCCAGCCCCGGCCCCGGCCCCGGCCCCGGCCCCC
GCCCCGGCCCCGGCCCCGGACGCGGCGCCTCAAGAGAGCGCCGAGCAGGGCGCGAACCAGGGGCAGCGCG
GCCAGGAGCCTCTCGCTGACCAGCTGCACTCGGGGATTTCGGGACGTCCCGCGGCCGGCACCGCGGCCGC
CAGCGCCAACGGCGCGGCGATCAAGAAGCTGTCCGGGCCTCTGATCTCCGATTTCTTCGCCAAGCGCAAG
AGATCAGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCGTGTCCCTCTCCAAGCGCCGCCCCTGGCG
TGGGCTCGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGA

Translation (316 aa):
MSDASLRSTSTMERLVARGTFPVLVRTSACRSLFGPVDHEELSRELQARLAELNAEDQNRWDYDFQQDMP
LRGPGRLQWTEVDSDSVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVP
VPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP
APAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLISDFFAKRK
RSAPEKSSGDVPAPCPSPSAAPGVGSVEQTPRKRLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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