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Report for CCDS86169.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86169.1 Public Homo sapiens 11 CDKN1C 24 110 108 CCDS HistoryNCBI Gene:1028Re-query CCDS DB by CCDS ID:86169.1Re-query CCDS DB by GeneID:1028See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86169.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000647251.1 ENSP00000496631.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647251.1Link to Ensembl Protein Viewer:ENSP00000496631.1Re-query CCDS DB by Nucleotide ID:ENST00000647251Re-query CCDS DB by Protein ID:ENSP00000496631
Original member Current member NCBI NM_001362475.2 NP_001349404.1 Accepted alive Link to Nucleotide Sequence:NM_001362475.2Link to Protein Sequence:NP_001349404.1Re-query CCDS DB by Nucleotide ID:NM_001362475Re-query CCDS DB by Protein ID:NP_001349404Link to BLAST:NP_001349404.1

Chromosomal Locations for CCDS 86169.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 2883774 2883910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 2883999 2884134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 2885202 2885456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGGAGCGTCTTGTCGCCCGTGGGACCTTCCCAGTACTAGTGCGCACCAGCGCCTGCCGCAGCCTCTTCG
GGCCGGTGGACCACGAGGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGAGCTGAACGCCGAGGACCA
GAACCGCTGGGATTACGACTTCCAGCAGGACATGCCGCTGCGGGGCCCTGGACGCCTGCAGTGGACCGAA
GTGGACAGCGACTCGGTGCCCGCGTTCTACCGCGAGACGGTGCAGATTTCTTCGCCAAGCGCAAGAGATC
AGCGCCTGAGAAGTCGTCGGGCGATGTCCCCGCGCCGTGTCCCTCTCCAAGCGCCGCCCCTGGCGTGGGC
TCGGTGGAGCAGACCCCGCGCAAGAGGCTGCGGTGAGCCAAAGCCCAAAGAGCCCCGAGGGAACCTGCCG
GGGCAGCGGACGTTGGAAGGGCGCTGGGCCTCGGCTGGGACCGTTCATGTAGCAGCAACCGGCGGCGGCT
GCCGCAGAGCAGCGTTCGGTTTTGTTTTTAAATTTTGA

Translation (175 aa):
MERLVARGTFPVLVRTSACRSLFGPVDHEELSRELQARLAELNAEDQNRWDYDFQQDMPLRGPGRLQWTE
VDSDSVPAFYRETVQISSPSARDQRLRSRRAMSPRRVPLQAPPLAWARWSRPRARGCGEPKPKEPRGNLP
GQRTLEGRWASAGTVHVAATGGGCRRAAFGFVFKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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