NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS2484.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2484.1 Public Homo sapiens 2 ARMC9 24 110 108 CCDS HistoryNCBI Gene:80210Re-query CCDS DB by CCDS ID:2484.1Re-query CCDS DB by GeneID:80210See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2484.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349938.8 ENSP00000258417.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000349938.8Link to Ensembl Protein Viewer:ENSP00000258417.5Re-query CCDS DB by Nucleotide ID:ENST00000349938Re-query CCDS DB by Protein ID:ENSP00000258417
Original member Current member EBI ENST00000684718.1 ENSP00000507543.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684718.1Link to Ensembl Protein Viewer:ENSP00000507543.1Re-query CCDS DB by Nucleotide ID:ENST00000684718Re-query CCDS DB by Protein ID:ENSP00000507543
Original member Current member EBI ENST00000683575.1 ENSP00000507743.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683575.1Link to Ensembl Protein Viewer:ENSP00000507743.1Re-query CCDS DB by Nucleotide ID:ENST00000683575Re-query CCDS DB by Protein ID:ENSP00000507743
Original member Current member EBI ENST00000684432.1 ENSP00000508405.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684432.1Link to Ensembl Protein Viewer:ENSP00000508405.1Re-query CCDS DB by Nucleotide ID:ENST00000684432Re-query CCDS DB by Protein ID:ENSP00000508405
Original member Current member NCBI NM_001291656.2 NP_001278585.2 Accepted alive Link to Nucleotide Sequence:NM_001291656.2Link to Protein Sequence:NP_001278585.2Re-query CCDS DB by Nucleotide ID:NM_001291656Re-query CCDS DB by Protein ID:NP_001278585Link to BLAST:NP_001278585.2
Original member Current member NCBI NM_001352755.2 NP_001339684.2 Accepted alive Link to Nucleotide Sequence:NM_001352755.2Link to Protein Sequence:NP_001339684.2Re-query CCDS DB by Nucleotide ID:NM_001352755Re-query CCDS DB by Protein ID:NP_001339684Link to BLAST:NP_001339684.2
Original member Current member NCBI NM_001352756.2 NP_001339685.2 Accepted alive Link to Nucleotide Sequence:NM_001352756.2Link to Protein Sequence:NP_001339685.2Re-query CCDS DB by Nucleotide ID:NM_001352756Re-query CCDS DB by Protein ID:NP_001339685Link to BLAST:NP_001339685.2
Original member Current member NCBI NM_025139.6 NP_079415.4 Accepted alive Link to Nucleotide Sequence:NM_025139.6Link to Protein Sequence:NP_079415.4Re-query CCDS DB by Nucleotide ID:NM_025139Re-query CCDS DB by Protein ID:NP_079415Link to BLAST:NP_079415.4

Chromosomal Locations for CCDS 2484.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 231206239 231206289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231208127 231208252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231214831 231215001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231216638 231216793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231222728 231222820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231226774 231226798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231235224 231235381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231239943 231240041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231256586 231256620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231258991 231259102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231262306 231262398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231270982 231271072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231272955 231273078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231276636 231276775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231278382 231278458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231282059 231282133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231291353 231291443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231296198 231296253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231331793 231331897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231344975 231345094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1998 nt):
ATGGGGGACATTCTGGCTCATGAATCTGAATTACTTGGACTAGTGAAAGAGTATTTAGATTTTGCTGAAT
TTGAAGACACCTTGAAAACATTTTCAAAAGAATGCAAAATAAAAGGAAAACCATTGTGTAAAACAGTAGG
CGGATCTTTCAGAGACTCCAAATCATTGACAATTCAGAAGGATCTTGTCGCTGCATTTGACAACGGAGAC
CAGAAGGTGTTCTTCGATCTGTGGGAGGAGCACATTTCAAGTTCCATCCGAGATGGGGACTCCTTTGCCC
AGAAGCTGGAATTCTATCTCCACATCCATTTTGCCATCTATCTTTTGAAGTACTCTGTGGGGAGACCGGA
CAAAGAGGAGCTGGATGAAAAGATTTCCTACTTCAAAACCTACCTGGAGACCAAAGGGGCAGCCTTGAGC
CAGACCACAGAGTTTCTTCCTTTCTATGCCCTTCCTTTTGTTCCCAACCCTATGGTGCACCCCTCATTTA
AAGAACTCTTCCAGGATTCCTGGACTCCAGAGTTAAAGTTGAAGTTGATAAAGTTTCTAGCTTTAATATC
TAAAGCCAGCAACACGCCAAAGCTTTTAACAATATATAAGGAGAATGGACAAAGTAACAAAGAAATCTTG
CAGCAGCTCCACCAGCAGCTGGTTGAAGCTGAACGTAGGTCAGTGACATACCTCAAACGGTACAATAAGA
TCCAGGCCGACTACCACAATCTCATTGGAGTCACAGCAGAGCTGGTGGATTCTCTAGAGGCCACAGTCAG
CGGCAAGATGATCACCCCTGAGTACCTCCAGAGCGTCTGTGTCCGCCTGTTCAGTAACCAGATGCGGCAG
AGCCTGGCGCATAGTGTGGACTTCACGAGGCCTGGGACGGCATCCACCATGTTACGAGCCTCCTTGGCAC
CCGTGAAATTGAAGGATGTCCCATTACTGCCCTCCTTGGATTATGAGAAACTGAAGAAGGATTTGATTTT
GGGGAGTGACCGCTTGAAAGCCTTCTTGTTGCAGGCTCTGCGCTGGCGCTTGACCACATCCCATCCTGGA
GAGCAGAGGGAGACCGTTCTGCAAGCCTACATCAGCAATGACCTCTTGGACTGTTATAGCCACAACCAGA
GGAGTGTGCTTCAGTTGCTGCACTCCACGAGCGACGTGGTGCGGCAGTACATGGCCAGGCTCATCAATGC
TTTTGCGTCACTGGCAGAAGGTCGCCTCTACCTTGCCCAGAACACAAAGGTGCTGCAGATGCTGGAGGGA
AGGCTGAAGGAGGAGGACAAGGATATCATCACCAGGGAGAATGTTCTTGGGGCCCTGCAGAAGTTCAGTC
TCAGGCGCCCGCTGCAGACAGCGATGATTCAAGACGGCCTCATCTTCTGGCTGGTTGATGTTCTGAAGGA
CCCTGACTGCCTGTCTGACTACACGCTGGAGTACTCGGTGGCTTTGCTCATGAACCTCTGCCTCCGCAGC
ACAGGGAAGAACATGTGTGCCAAGGTGGCAGGCCTCGTGCTCAAAGTCCTTTCGGATCTTCTTGGCCATG
AAAACCATGAGATACAGCCGTATGTGAATGGAGCTCTGTACAGCATCCTTTCTGTTCCATCCATTCGTGA
GGAAGCAAGAGCAATGGGAATGGAAGACATCCTACGCTGCTTCATCAAAGAAGGCAATGCTGAAATGATC
CGCCAGATAGAATTCATCATCAAGCAGCTAAATTCCGAAGAGCTACCAGATGGTGTTCTTGAATCTGATG
ATGATGAAGATGAAGATGATGAAGAGGACCATGACATCATGGAAGCCGATCTGGACAAAGACGAACTGAT
CCAGCCCCAGCTCGGAGAACTCTCAGGAGAGAAGCTTCTGACCACGGAGTACCTGGGGATCATGACCAAC
ACGGGGAAGACAAGGCGGAAGGGGCTGGCTAATGTGCAGTGGAGCGGGGATGAGCCCCTGCAAAGGCCCG
TCACCCCCGGCGGCCACAGAAACGGGTACCCAGTGTAA

Translation (665 aa):
MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKIKGKPLCKTVGGSFRDSKSLTIQKDLVAAFDNGD
QKVFFDLWEEHISSSIRDGDSFAQKLEFYLHIHFAIYLLKYSVGRPDKEELDEKISYFKTYLETKGAALS
QTTEFLPFYALPFVPNPMVHPSFKELFQDSWTPELKLKLIKFLALISKASNTPKLLTIYKENGQSNKEIL
QQLHQQLVEAERRSVTYLKRYNKIQADYHNLIGVTAELVDSLEATVSGKMITPEYLQSVCVRLFSNQMRQ
SLAHSVDFTRPGTASTMLRASLAPVKLKDVPLLPSLDYEKLKKDLILGSDRLKAFLLQALRWRLTTSHPG
EQRETVLQAYISNDLLDCYSHNQRSVLQLLHSTSDVVRQYMARLINAFASLAEGRLYLAQNTKVLQMLEG
RLKEEDKDIITRENVLGALQKFSLRRPLQTAMIQDGLIFWLVDVLKDPDCLSDYTLEYSVALLMNLCLRS
TGKNMCAKVAGLVLKVLSDLLGHENHEIQPYVNGALYSILSVPSIREEARAMGMEDILRCFIKEGNAEMI
RQIEFIIKQLNSEELPDGVLESDDDEDEDDEEDHDIMEADLDKDELIQPQLGELSGEKLLTTEYLGIMTN
TGKTRRKGLANVQWSGDEPLQRPVTPGGHRNGYPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH