NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS48553.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48553.1 Public Mus musculus 10 Crybg1 23 108 98 CCDS HistoryNCBI Gene:11630Re-query CCDS DB by CCDS ID:48553.1Re-query CCDS DB by GeneID:11630See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48553.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020017.13 ENSMUSP00000020017.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020017.13Link to Ensembl Protein Viewer:ENSMUSP00000020017.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000020017Re-query CCDS DB by Protein ID:ENSMUSP00000020017
Original member Current member NCBI NM_172393.2 NP_765981.2 Accepted alive Link to Nucleotide Sequence:NM_172393.2Link to Protein Sequence:NP_765981.2Re-query CCDS DB by Nucleotide ID:NM_172393Re-query CCDS DB by Protein ID:NP_765981Link to BLAST:NP_765981.2

Chromosomal Locations for CCDS 48553.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 43951869 43951957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43956649 43956811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43958248 43958406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43958814 43958937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43961429 43961568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43964578 43964707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43966301 43966413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43967465 43967497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43967689 43967815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43973658 43973803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43973894 43974020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43975027 43975184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43976798 43976833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43979481 43979607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43986251 43986390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43989094 43989253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43992455 43992573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43992658 43992705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43997052 43999347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 44003428 44004068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5076 nt):
ATGGAAAAGAGGTCAAGCGGCCGCCGGTCTGGTCGGCGGAGGAAGTCGCAGAAATCCACCGACTCCCCGG
GTGCGGATGCGGTGGCTCCCGAGAGTGCGGCCAAGGACGAGGCGGTGTTCGACGACGAGGTGGCGCCAGA
CGCTGCGGCTGAGAACTGCTTGGCGGAAAGGAAAGTGAAATCGGTACAAGCGGTTCCCGACGGAGGCGCA
GCCCCGGTCGCCTGCCCGGAGCCAAAGGCCAGCTCCTGCCCCAGAGGGCAACCCCGAGGGGAACCGGACC
GCAGCAAGCCCCTGTCGCCCACCAAGCGGAAGGGTCGCAGCCGTGTCCCCGAGGCGGTGCCCAGCTCGCC
CGGCAGTGGCTCGCGCGCTCCCGCCAAGGAGTCCCCACCCAAGAGGGCGCCCGCTGCGGCGGACAGCGGC
GAGGAGGCGGGCCGCGTCGTCCCGCGCGAGCTCACCGTCAAAAGCAGCTCGTTGCTGCCCGAGATCAAGC
CAGAGCACAAGAGGGGTCCTCTGCCCCACCACTTTGATAGCCGGGGCGACGGGGGTCGCAGCAGGGGAAC
AGGAGCGTCCGACGCCGACGGCCTGAAGCCCAGGAACCAGTTCGGTGTGGGCAGGTCTACTGTGACCACC
AAAGTGACCCTCCCCGCCAGACCCAAACATGTGGAACTAAATCTGAAAACTCCGAAGAATCCTGACAGTT
TGGGAAATGAGCACAACTCATTTAGCCAGCCAGTTCATAAGGGGAACACAGCCAACAAAATCTCCTTATT
TGAAAACAAGCGGGCTAACAGTAGCCCCCGCCACCCCGACGTCCGTAACACAAGGAACAATCCTCCCTCT
AGTAAGACATTTGTTGGGAGGGCGAAGCTGAACTTAGCCAAAAAGGCCAAAGAAATGGAGCAACCCGAAA
AGAAAGCTGTGTCAACCAGCCACCAGAATGGCCTGGTGGTCAAAGAGCCATCTGCAGAAGGGAAAGGCAC
AGCAGTCCCTGTCCCCAGAGAAGAGATTCGTCCAGCCACCAGAGGAGGGGAAGGAGAGTCCACCAAGGAT
CAGGTCCTCCGCCCTGAGCCTGAGCAAAGTGATAAGCTGGATGTACAAACAGACACTGCCTATCCTTCCC
ACCCAGGGCCCACTGCTCTGGTTCCTGTGAAGGACTCTGAGCTCTCAGGAGAGGGCCAGCCAGAGGCTGC
TGACAGCAAAGGCCCCGTCCTTAACAACACAAGTGATGTTGCACAGGACATCGCTGCCATTTGTGATGCC
AGAGAGGCTCCCCCAAAGCCACAGGATGCATTTTCTGACTCACAGCCAGCTTCAGCGGCTGAGTCAGCTA
GGGAGTCATCTCTCCCGCCTTCTGCACCCATTTCTGTGGACGCTCCCCAAGATGGCTGTGTTCAAGTTCC
CATATGCAGTGTTCCCTGCACTGCTCTAGAAGTGTCAGAAAACCACAATGGGTGTGTTTCGCCAGTCTCT
CCTCACACTGAGAAAACTCCCATCTCCAAACCTGGAGTGGGAGAAGCCAGTCCCCCTTCCACTCCAGAGC
ACAGCCCAGAAACTATGGGGAAAGACTGTCCCTCCAAAGTCCTCGTCCAGGTCCGGTCCTTTGTGCTTCC
CGTGGAGAATCCTCAGGATGTGAGCTCTCAGGTCATCTCAGAGAGCTCTGAAGTTAGAGAGGCACAGCTG
CCAAGCTGTCACAGTAATGAGCCTGAAGTGGTGTCTGTCACCACTTGTGTTCCGCAGCACGAGGATGCAC
CAGACACATCACCCAAGGACATCCATCACAGAGAAGGACATGTGGCACAGTCTCGACCACACATCACACA
GTCAGGACCTGAGAAGGCTCCGCCCATCCAGAGCAGCAGTGGGATGCCCCAGACAGCGGAGTTCATCCTC
ACCCACTCTCCCAGCAGCAGAAGTCATGCAGAAGGCCCCCAAAGGCCAGGTCAAGATGCGACCAGCCCAC
TTACCCCTACCAGGCTTTTGAACATTTCTGCTGGTAGTGACAATAGTGTCTTGGATTCTTCTTCTGATAT
GGAAAAATTCACTGAAATTATTAAAAAGATGGACAGTGCAGTATGTGTGCCCCAGAAAAAGAAGAAGGCC
CGGGTCCCAAACTCTCCAGCCCCTCACTTCGCTATGCCTCCCATTCACGAGGACAGTTTGGAAAAGGTGT
TTGATCCCAACGTGTTCACCATTGGTTTAGGGAAGAAGAAGGAAAGCCTGGCAGAGGTGTCACCAGCTTT
GCACTTGTTGCAGAACCACGACCCCATATCCAAACTGAGAGCCAAGCGTGCATCCACCGAGCAGAGCATC
GTCTTCAAGTCCTTGCACACTAACAGTAATGGGAAGAGCGAGCCACAGACCACTTCAGAAGCAAGTGACA
AGGAGAACAGGGACATCAACAGCGGCGGCGTTAAGAGGTCACGGCTAGAAAACAGCACGCTTTTCTCAAG
CATGCTTTCTTCTCTGCCACAAGACAAAGTCTTTTCTCCCTCCGTGACGTCAGTCAACACAATGAGCACA
TCTTTTAGCACTTCTCAGAACAGCTCCGTATCTCAGTCATCAGTGGTACAGCCCAGGAAGGAGGGTGGCC
TGCCCTGTGGCTCAGACAAAGAACAGCCACACCTTGCACCCCACAACTCCTTAAAGGTCTTCAATTTCAA
TTCATCAAATACATCTCGTCTGGGTTCCAGCCACATGGAAAAGTACCCACAAAAAGAGGGAAGCAAGGAA
GATGTGAATTCTCAGGGCAACCTACAATTGCCAGAAAACAACCTTTCAGACTTACCCAAACTGAAGAACA
GCGATGGCGTGGAAGGTATTCTGAAGTCAAACCTGCCGAATGTTGGGAGCGTGGACGCGGACTTCCTGGG
CCTTTTCAAAGCAAGCCGGTATGACCCAGGCCATTCCTTTTCTGGAATGTCCTTATCAGACTCTATGACT
CTTAGAGGAAGTATGCACAGCAAACTCAACCCCCGGCCTGGCAAGGTAGTGATATTCAGTGAGCCCGACG
TCTCTGAGGAGTGCATTGAGGTGTTTGGGGACATCCAGGACTGCAGCTCCTGGCGCCTCTCTCCAGTGAT
AGTAGTGAAAGTTGTCCGAGGATGTTGGATTTTGTATGAGAAAGCCAATTTTGAAGGGCATTCTCTTGCT
TTAGAAGAAGGTGAACTGGAACTCTCTAGTATCTGGGGAACAGAGGAAATGTTGGATGAAGAAGCAGAGT
CTGATAAACCTGTAGTGATTGGTTCCATCAGACACGTGGTTCAGGATTACAGAATTAGTCAGATCGACTT
GTTTACTGAGCCTGAAGGGTTAGGACTCCTGAACTCGTACTTTGATGACACTGAGGAAATGCAGGGCTTC
CCTGTGATGCAGAAGACGTGTTCCATCAAAGTGCACTGGGGCACATGGCTGATCTATGAAGAGCCTGGAT
TCCAAGGTGTCCCCTTCATTCTGGAGCCCGGAGAATACCCTGACCTATCCTTCTGGGATACCGAGGAAGC
GTACATCGGATCCATGCGGCCTCTGAAAATGGGTGGCCGTAAAGTTGAATTCCCTACAGATCCAAAGGTA
GTTATTTATGAAAAGCCTTCCTTTGAAGGAAGGTGTATGGAGCTAGAAACAGAAATGAGTAGTTTTATCA
TGGAAGGAGGTGAGACAGAAGAAACAACTGGAAACAACAACTTGCCCTTTACATCCGTGGGGTCTATGAA
AGTCCTAAGAGGCGTCTGGGTTGCTTATGAGAAGTGTGGCTTCACTGGCCACCAGTATTTGCTGGAGGAG
GGAGAATACAGGGACTGGAACGCCTGGGGAGGCTACAATGGAGAGCTCCAGTCTCTGCGGCCTATATTAA
GTGATTTTTCAAATGCGCACATGATAATGTACAGTGAGAAGAACTTTGGCTCCAAAGGTTCCAGTATTGA
TGTGTTGGGAATTGTTGCCAATTTGAAGGAGACCGGCTACGGAGTGAAGACACAGTCAATCAATGTACTG
AGTGGCGTGTGGGTAGCCTATGAAAACCCGGACTTCACGGGGGAGCAGTATGTCCTGGATAAAGGCTTCT
ACACCAGTTTTGAGGATTGGGGAGGCAAAAATTGTAAGATCTCTTCCGTCCAACCCATATGCCTGGATTC
TTTCACTGGCCCCAGGAGACGAAATCAGATTCACTTGTTTTCAGAACCACAGTTCCAAGGTCAAAGTCAA
AGTTTTGAAGAAACAATAGATCAGATTGACGACTCCTTTCAGACCAAGTCTTGCAGAGTTTTGGGAGGCA
GCTGGGTTGCTTATGATGGAGAAAATTTCTCTGGCAATCAGTATGTACTGGAAGAAGGCCACTATCCTTG
TCTCTCGGCAATGGGATGCCTGCCTGGAGCAACCCTGAAGTCTCTTCGCTTTATAGATTTTGAATTTTCC
GAACCAACAATTATTCTTTTCGAAAGAGAAAACTTCAAAGGAAAAAAGATAGAACTGAACGCAGAAACAG
TCAATCTCCGATCCTTGGGGTTCAACACTCAGATCCGCTCTGTGCGGGTCGTTGGTGGCATATGGGTTAC
CTATGAATATGGCAATTACAGAGGCCGGCAGTTCCTGCTGTCTCCTGCAGAAGTACCAAACTGGTATGAG
TTCAGTGCCTGTCGCCAAATAGGCTCCCTCCGGCCCTTTGCTCAGAAACGAATTTACTTCAGACTTCGAA
ACAAAGCAACAGGACTATTTATGTCAACCAACGGGAACTTGGAAGACCTGAAGCTTCTCCGAGTCCAGGT
CATGGAAGATGTTGGTGCTGATGATCAGATCTGGATCTATCAAGAAGGGTGCATCAAATGCAGGATAGCA
GAAGACTGCTGCCTGACGATCGTGGGCAGCCTCGTCACGTCTGGCTCCAAACTAGGACTGGCCCTCGATC
AAAATGTCGACAGTCAGTTCTGGTGCATGAAGTCCGACGGCAGGATCTACAGCAAGATGAAACCAAATTT
AGTGTTGGATGTGAAAGGGGGTGCGCAGTATGATCAAAATCACATCATCCTCAACACAGTGAGCACAGAG
AAGTTAACACAAGTGTGGGAAGCCATGGTCCTGTGA

Translation (1691 aa):
MEKRSSGRRSGRRRKSQKSTDSPGADAVAPESAAKDEAVFDDEVAPDAAAENCLAERKVKSVQAVPDGGA
APVACPEPKASSCPRGQPRGEPDRSKPLSPTKRKGRSRVPEAVPSSPGSGSRAPAKESPPKRAPAAADSG
EEAGRVVPRELTVKSSSLLPEIKPEHKRGPLPHHFDSRGDGGRSRGTGASDADGLKPRNQFGVGRSTVTT
KVTLPARPKHVELNLKTPKNPDSLGNEHNSFSQPVHKGNTANKISLFENKRANSSPRHPDVRNTRNNPPS
SKTFVGRAKLNLAKKAKEMEQPEKKAVSTSHQNGLVVKEPSAEGKGTAVPVPREEIRPATRGGEGESTKD
QVLRPEPEQSDKLDVQTDTAYPSHPGPTALVPVKDSELSGEGQPEAADSKGPVLNNTSDVAQDIAAICDA
REAPPKPQDAFSDSQPASAAESARESSLPPSAPISVDAPQDGCVQVPICSVPCTALEVSENHNGCVSPVS
PHTEKTPISKPGVGEASPPSTPEHSPETMGKDCPSKVLVQVRSFVLPVENPQDVSSQVISESSEVREAQL
PSCHSNEPEVVSVTTCVPQHEDAPDTSPKDIHHREGHVAQSRPHITQSGPEKAPPIQSSSGMPQTAEFIL
THSPSSRSHAEGPQRPGQDATSPLTPTRLLNISAGSDNSVLDSSSDMEKFTEIIKKMDSAVCVPQKKKKA
RVPNSPAPHFAMPPIHEDSLEKVFDPNVFTIGLGKKKESLAEVSPALHLLQNHDPISKLRAKRASTEQSI
VFKSLHTNSNGKSEPQTTSEASDKENRDINSGGVKRSRLENSTLFSSMLSSLPQDKVFSPSVTSVNTMST
SFSTSQNSSVSQSSVVQPRKEGGLPCGSDKEQPHLAPHNSLKVFNFNSSNTSRLGSSHMEKYPQKEGSKE
DVNSQGNLQLPENNLSDLPKLKNSDGVEGILKSNLPNVGSVDADFLGLFKASRYDPGHSFSGMSLSDSMT
LRGSMHSKLNPRPGKVVIFSEPDVSEECIEVFGDIQDCSSWRLSPVIVVKVVRGCWILYEKANFEGHSLA
LEEGELELSSIWGTEEMLDEEAESDKPVVIGSIRHVVQDYRISQIDLFTEPEGLGLLNSYFDDTEEMQGF
PVMQKTCSIKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEEAYIGSMRPLKMGGRKVEFPTDPKV
VIYEKPSFEGRCMELETEMSSFIMEGGETEETTGNNNLPFTSVGSMKVLRGVWVAYEKCGFTGHQYLLEE
GEYRDWNAWGGYNGELQSLRPILSDFSNAHMIMYSEKNFGSKGSSIDVLGIVANLKETGYGVKTQSINVL
SGVWVAYENPDFTGEQYVLDKGFYTSFEDWGGKNCKISSVQPICLDSFTGPRRRNQIHLFSEPQFQGQSQ
SFEETIDQIDDSFQTKSCRVLGGSWVAYDGENFSGNQYVLEEGHYPCLSAMGCLPGATLKSLRFIDFEFS
EPTIILFERENFKGKKIELNAETVNLRSLGFNTQIRSVRVVGGIWVTYEYGNYRGRQFLLSPAEVPNWYE
FSACRQIGSLRPFAQKRIYFRLRNKATGLFMSTNGNLEDLKLLRVQVMEDVGADDQIWIYQEGCIKCRIA
EDCCLTIVGSLVTSGSKLGLALDQNVDSQFWCMKSDGRIYSKMKPNLVLDVKGGAQYDQNHIILNTVSTE
KLTQVWEAMVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH