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Report for CCDS45024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45024.1 Public Homo sapiens 13 N4BP2L2 24 110 108 CCDS HistoryNCBI Gene:10443Re-query CCDS DB by CCDS ID:45024.1Re-query CCDS DB by GeneID:10443See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 45024.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399396.7 ENSP00000382328.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399396.7Link to Ensembl Protein Viewer:ENSP00000382328.3Re-query CCDS DB by Nucleotide ID:ENST00000399396Re-query CCDS DB by Protein ID:ENSP00000382328
Original member Current member NCBI NM_033111.5 NP_149102.3 Accepted alive Link to Nucleotide Sequence:NM_033111.5Link to Protein Sequence:NP_149102.3Re-query CCDS DB by Nucleotide ID:NM_033111Re-query CCDS DB by Protein ID:NP_149102Link to BLAST:NP_149102.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149102.3 752 Q92802-3 752 100% 0 0

Chromosomal Locations for CCDS 45024.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 32436382 32436405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32438652 32438737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32442388 32444126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32517857 32518003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32521373 32521449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32522182 32522270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32527458 32527532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32537006 32537027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2259 nt):
ATGTCTTATGGTGAAATTGAAGAATTCTGCTTGGTCAGAATCGTGATGGCATTGTGTTCAGCACTGATGA
CTATTTTCACCATCAAGATGGGTACAGCAAAACAAGCTATCGATCAGGGAAGATCTCCAGTTATAATAGA
TAACACTAATATACAAGCTTGGGAAATGAAGCCATATGTGGAAGTGGCCATAGGAAAAGGATACAGAGTA
GAGTTTCATGAACCTGAAACTTGGTGGAAATTTGATCCTGAAGAATTAGAAAAGAGGAATAAACATGGTG
TGTCTCGAAAGAAGATTGCTCAGATGTTGGATCGTTATGAATATCAAATGTCCATTTCTATTGTAATGAA
TTCAGTGGAACCATCACACAAAAGCACACAAAGACCTCCTCCTCCACAGGGGAGACAGAGAGAAAGAGTT
TTGAAGAAAACTGGGCATAGGCTCAGCAAAACCAAACAGAAGAGGAACAGAAAAAGAAACAAAAAGCAGA
ACAGTCAGAATAGAATCATGGAGGAAAACTCATTAGAATTCTTAAGTGATCTTACACCGGGAGATCAGGA
CCCATCTCAGAGTGAAGAGGAAGACATTGAAAAGACCAGAAGAGAATCAGAATATCCCTTCATTGATGGT
CTACAAAATGAAGTCGGAGATTTTGTGACTGGATATAAAGAAAAAAGATGGAAAAATAAAGATCCTAAAG
ACAGTTTCCAAAACGTTATGTCTATAGTTGAATTAGACAACACACCAAAGAATTACCTCTCTAAGGAAGG
TGATAACTTGTTTGTAAGTTTGTTACTGAGGCCAAATGAAATCTCCGTTACTTGTCCAATACTGACTCAA
AACCTTTCCTGTGTAACAACTGATGACTGCTCTGGCATGAAGGTAGAAAAGCATATTAGAAATAGGCATA
CCATAGCATTAGACACCCAGGACCTTTCTGCGGAAACTTCATGCTTATTTATGAAGAAGAGAGAAATAGT
AGATAAAAATCTCTCACATGAACCCATTCTGTGCCATCAACATGGAATCAGAATGTCAGATAAAGTTTTA
AGAGAGGAACAAGTGTATACAACTAAAATCAATCACTGGGCTTTTTTCACAACCAATTTATCTGATGAAG
ATTTACAGCTGGGCTCTGACAGACAGCCCTATTTTGGTAGCTGGCCTGCAGGACCTCATAAGTTTATATG
TGAACAGAGACCAAAGAAAGATAGAGCATGTAAGTTGGCTGGTCCTGACAGCAGGGGGCAATGGATTCAA
ATGATCTTCACTTCGGTGGCAGCATCAGAACCAGGAAACAATCCAGAAATATTGACAGACAAACTACTGA
TAGGAAATGAAGATTTTTCACCTCCACCTGAAACTATGGATTCATTCATAGAAACAAACCTCTTCAGAAG
CTGCTTACCTCAACCGGATATACCAAAGAATGCCTTAGAATCAACAAAAAATAAGAAAAGGAGGAAGAAA
AGGATTTTCAATTTGGTACCAAATTTTGACTTATTAGGACAGAGTCGTATCGGTGTAAAAGAAAGGGAGA
AATGTGACCTGTTAACAAAAAACCATGGACTAAAAATTACTTTGGGAGAAGAAAAAGATAGAATTTCAGA
AAGGAACAGTGAAGAGGAGAATAAACAAAAACTTATGACCTTTGATCATCATCCATTGTGGTTTTACCTT
GATATTATCAAAGCTACCCCTTTAAATATTGATGGACAGCGTTATTCTCATTGCCTGTCATTTAACAGAC
TAAGGTGCTCTGCATCTTTATACAAAAATTATATTCCTTCTTTTGTGCTACATAATTTATCTAGTATTTG
GAAGCCATCTTTTACAAACAAGAAACTGTTTTTGACTTTCGAATCTCAGACAAGAGTAGGTAATAAACTA
AATGATGCAGGGTTTATTTCTCCAGAAATTTTACATAGTCATCCTGATACTTCGTGCTCTTTGGGAGTCA
CTTCTGATTTTCACTTTTTAAATGAAAGGTTTGATAGAAAGCTGAAAAGATGGGAAGAACCTAAGGAATT
ACCAGCTGAGGACAGCCAAGACTTAACAAGCACTGACTACCGTTCCCTTGAGCTACCATTATCACAAGGG
TTTGCCTTTCAATTAGTAAAGCTTTTTGGATCTCCAGGCGTTCCAATGGAATCCTTGTTGCCTGATGACT
ATGTGGTTCCCCTTGACTGGAAGACACTAAAGATGATCTACTTGCAATGGAAGATGTCAGTGGAGAAAAG
ACAGAAGAAGATTGGTTGA

Translation (752 aa):
MSYGEIEEFCLVRIVMALCSALMTIFTIKMGTAKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRV
EFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQRERV
LKKTGHRLSKTKQKRNRKRNKKQNSQNRIMEENSLEFLSDLTPGDQDPSQSEEEDIEKTRRESEYPFIDG
LQNEVGDFVTGYKEKRWKNKDPKDSFQNVMSIVELDNTPKNYLSKEGDNLFVSLLLRPNEISVTCPILTQ
NLSCVTTDDCSGMKVEKHIRNRHTIALDTQDLSAETSCLFMKKREIVDKNLSHEPILCHQHGIRMSDKVL
REEQVYTTKINHWAFFTTNLSDEDLQLGSDRQPYFGSWPAGPHKFICEQRPKKDRACKLAGPDSRGQWIQ
MIFTSVAASEPGNNPEILTDKLLIGNEDFSPPPETMDSFIETNLFRSCLPQPDIPKNALESTKNKKRRKK
RIFNLVPNFDLLGQSRIGVKEREKCDLLTKNHGLKITLGEEKDRISERNSEEENKQKLMTFDHHPLWFYL
DIIKATPLNIDGQRYSHCLSFNRLRCSASLYKNYIPSFVLHNLSSIWKPSFTNKKLFLTFESQTRVGNKL
NDAGFISPEILHSHPDTSCSLGVTSDFHFLNERFDRKLKRWEEPKELPAEDSQDLTSTDYRSLELPLSQG
FAFQLVKLFGSPGVPMESLLPDDYVVPLDWKTLKMIYLQWKMSVEKRQKKIG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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