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Report for CCDS6734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6734.1 Public Homo sapiens 9 TRIM14 24 110 108 CCDS HistoryNCBI Gene:9830Re-query CCDS DB by CCDS ID:6734.1Re-query CCDS DB by GeneID:9830See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6734.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342043.3 ENSP00000343990.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342043.3Link to Ensembl Protein Viewer:ENSP00000343990.3Re-query CCDS DB by Nucleotide ID:ENST00000342043Re-query CCDS DB by Protein ID:ENSP00000343990
Original member Current member EBI ENST00000341469.7 ENSP00000344208.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341469.7Link to Ensembl Protein Viewer:ENSP00000344208.2Re-query CCDS DB by Nucleotide ID:ENST00000341469Re-query CCDS DB by Protein ID:ENSP00000344208
Original member Current member EBI ENST00000375098.7 ENSP00000364239.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375098.7Link to Ensembl Protein Viewer:ENSP00000364239.3Re-query CCDS DB by Nucleotide ID:ENST00000375098Re-query CCDS DB by Protein ID:ENSP00000364239
Original member Current member NCBI NM_014788.4 NP_055603.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014788.4Link to Protein Sequence:NP_055603.2Re-query CCDS DB by Nucleotide ID:NM_014788Re-query CCDS DB by Protein ID:NP_055603Link to BLAST:NP_055603.2
Original member Current member NCBI NM_033219.3 NP_150088.1 Accepted alive Link to Nucleotide Sequence:NM_033219.3Link to Protein Sequence:NP_150088.1Re-query CCDS DB by Nucleotide ID:NM_033219Re-query CCDS DB by Protein ID:NP_150088Link to BLAST:NP_150088.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055603.2 442 Q14142-1 442 100% 0 0
NP_150088.1 442 Q14142-1 442 100% 0 0

Chromosomal Locations for CCDS 6734.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 98087470 98088005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98091909 98092001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98094867 98095029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98099931 98100164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98109889 98109984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98118982 98119188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGGCGGGCGCGGCGACCGGGAGCCGGACCCCTGGGAGGTCGGAGCTTGTCGAGGGATGCGGCTGGCGCT
GC
CCGGAGCATGGCGACCGCGTGGCTGAGCTCTTCTGTCGCCGCTGCCGCCGCTGCGTGTGCGCGCTTTG
C
CCGGTGCTGGGCGCGCACCGTGGCCACCCTGTGGGCCTGGCGCTGGAGGCAGCGGTGCACGTGCAGAAA
CTC
AGCCAAGAATGTTTAAAGCAGCTGGCAATCAAGAAGCAGCAGCACATTGACAACATAACCCAGATAG
AA
GATGCCACCGAGAAGCTCAAGGCTAATGCAGAGTCAAGTAAAACCTGGCTGAAGGGGAAATTCACTGA
A
CTCAGATTACTACTTGACGAAGAGGAAGCGCTGGCCAAGAAATTCATTGATAAAAACACGCAGCTTACC
CTC
CAGGTGTACAGGGAACAAGCTGACTCTTGCAGAGAGCAACTTGACATCATGAATGATCTCTCCAACA
GG
GTCTGGAGTATCAGCCAGGAGCCCGATCCTGTCCAGAGGCTTCAGGCATACACGGCCACCGAGCAGGA
G
ATGCAGCAGCAGATGAGCCTCGGGGAGCTGTGCCATCCCGTGCCCCTCTCCTTTGAGCCCGTCAAGAGC
TTC
TTTAAGGGCCTCGTGGAAGCCGTGGAGAGTACATTACAGACGCCATTGGACATTCGCCTTAAGGAAA
GC
ATAAACTGCCAGCTCTCAGACCCTTCCAGCACCAAGCCAGGTACCTTGTTGAAAACCAGCCCCTCACC
A
GAGCGATCGCTATTGCTGAAATACGCGCGCACGCCCACGCTGGATCCTGACACGATGCACGCGCGCCTG
CGC
CTGTCCGCCGATCGCCTGACGGTGCGCTGCGGCCTGCTGGGCAGCCTGGGGCCCGTGCCCGTGCTGC
GG
TTCGACGCGCTCTGGCAAGTGCTGGCTCGTGACTGCTTCGCCACCGGCCGCCACTACTGGGAGGTTGA
C
GTGCAGGAGGCGGGCGCCGGCTGGTGGGTGGGCGCGGCCTACGCCTCCCTTCGGCGCCGCGGGGCCTCG
GCC
GCCGCCCGCCTGGGCTGCAACCGCCAGTCCTGGTGCCTCAAGCGCTACGACCTTGAGTACTGGGCCT
TC
CACGACGGCCAGCGCAGCCGCCTGCGGCCCCGCGACGACCTCGACCGGCTCGGCGTCTTCCTGGACTA
C
GAGGCCGGCGTCCTCGCCTTCTACGACGTGACGGGCGGCATGAGCCACCTGCATACCTTCCGCGCCACG
TTC
CAGGAGCCGCTCTACCCGGCCCTGCGGCTCTGGGAGGGGGCCATCAGCATCCCCCGGCTGCCCTAG


Translation (442 aa):
MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGLALEAAVHVQK
L
SQECLKQLAIKKQQHIDNITQIEDATEKLK
ANAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNTQLT
L
QVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQ
AYTATEQEMQQQMSLGELCHPVPLSFEPVKS
F
FKGLVEAVESTLQTPLDIRLKE
SINCQLSDPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARL
R
LSADRLTVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGAS
A
AARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
F
QEPLYPALRLWEGAISIPRLP




Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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