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Report for CCDS14519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14519.1 Public Homo sapiens X RADX 24 110 108 CCDS HistoryNCBI Gene:55086Re-query CCDS DB by CCDS ID:14519.1Re-query CCDS DB by GeneID:55086See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14519.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372548.9 ENSP00000361628.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372548.9Link to Ensembl Protein Viewer:ENSP00000361628.4Re-query CCDS DB by Nucleotide ID:ENST00000372548Re-query CCDS DB by Protein ID:ENSP00000361628
Original member Current member NCBI NM_018015.6 NP_060485.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018015.6Link to Protein Sequence:NP_060485.4Re-query CCDS DB by Nucleotide ID:NM_018015Re-query CCDS DB by Protein ID:NP_060485Link to BLAST:NP_060485.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060485.4 855 Q6NSI4-1 855 100% 0 0

Chromosomal Locations for CCDS 14519.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 106612081 106612723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106622651 106622793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106625090 106625282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106632625 106632733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106632932 106633023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106633130 106633252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106636543 106636647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106637760 106637924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106639527 106639687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106640552 106640721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106648313 106648386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106662015 106662305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106669163 106669330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106678128 106678258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2568 nt):
ATGTCTGGTGAGTCAGGACAGCCTGAGGCTGGTCCCTCACATGCAGGGCTAGATTGGCCGAACCCTGAGA
GGAATCGGGCTGGGGTCCCGGGAGGGGTGATCCGAAGAGCTGGTTCCCAAGGGCCCAGGTCCTGGATCCA
AAAGGTTCTTGAGCAGATTATGGACTCACCTCGCCAGTGTGTCACCCCCTCGGAGGTGGTGCCTGTAACT
GTGCTGGCCGTCCAGAGGTACCTGTTAGAGGATGAGCCACGCGACACGGTGCCCAAGCCTCCCCTTTATT
GCTATGATGTGACGATCTCAGATGGGGTGTACCAGGAGAAGTGCTACCTGGACCCCAGCTTGAACTCTCT
CGTATATCAAAATATTCTTAAAGTTGGCATTCAAATGAGAATTTCCAGGGTCTCATGTCTTTACAATGAG
AAAAGGATAGGCCAGGGGATCCTGTGCATAGATAACGTCCACTGTGGGGAGACTTCAGACAGTATTTCTT
TAGAAACTCCCTTCAGAAATAGAGCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCGGGAAGAGTCA
TTACCTGGCGCTGTGGAATAACGAAGATCCCTATGGAGATATCTGGTTAACAGACAAGCAACCTGAGGAA
CACAACTTTAGCGATACCAAAATAATTTCCCTTTCTCATCTTGAAATGACCTGGACTAACAGAAGAAATT
TTCCTGCATTGCTTGTGAGGATCTTACATAAATCAAAACTGCGATACTATGGAAAACCTGATAAAAAGAT
GATTGAACCATATCAGACCTTTTTGGAAGTTGCTGACAGTTCAGGCACAGTGTCAGTGATTATGTGGAAT
GCCCTGTGTCCTGAGTGGTATAAAAGTTTGCGGGTTGGTTTAGTTCTTCTGCTTCAAGACTATTCTGTTA
AAAAGAGTTATCCATTCAGAATACAGCCTGTCCCCGTGGATCCACAGATCAAACTAATTTCTACAATGGA
AATCTGCCTGAATCTTCGAGATCCCCCAACAAATATAATTATCATTCCAGAAAAGCAGGTGAAACCAGAA
TGGAGACTGCCAAAGCTAAATCACCGATTTACCACAAGGTCAGAACTGGATGATATGCCAGAAAATTGCA
TCTGTGATGTTATTGGCCTTTTAGTTTTTGTAGGAAGGGTCCAGCGGTCAAAAAAGAAAGAAAACCGTGA
AGATTTTTGGTCATATCGCTGGATTCACATTGCTGACGGTACTTCAGAACAACCATTTATAGTGGAACTG
TTTTCAACATCGCAGCCAGAAATCTTTGAAAATATTTACCCAATGGCATATTTTGTGTGTACACAGTTGA
AAGTTGTCAGAAATGACAATCAAGTACCTAAGCTGCTTTACCTCACCACTACAAATGAGAGTGGAGTGTT
TATTACTGGTCATAGAGGCCAGCCGTATACGTATGATGCCAAGGTAAAAAACTTTATTCAATGGATTAGA
ACAAAGTCTGATTCCGGGGAACAGAAGAATATGGTTATTGGTGGATATTACCCCTATCCACCAGTGCCAG
AGACATTTTCCAAGTATAGTAGTTCTATTAAAGTTGAGTCGCTCTTGACAGCTATAAGTGAAGTCAGGAA
GGAGATTGAAGACTTGCAGTATAGGGAACAAAAGCGCATTGCAATTCAGGGGATAATTACTGCTATAAAG
TATATCCCCCATAGCAGTGCGACTGAAAGTGCCTCAGCATCAGAAACACTTCGGAATGCTAACAGACCCT
CGACCTCTCAAGCAGCTAGAGTAGAAATTCAAGAAAGAAATGGTAAACGGCATCAAGATGATGAGCCTGT
GAATTCTCAGTATTTCCAAACTACATCTACAAATTTAAGTCTGAGCAATAAAATAAGAATTCTTCAAGGC
CCACACGCTAATCCAGTTGCTGTACCTCAACCAGGAGCTTCTGTACAAACAAAGGGAATTAAACCGGGCA
TGCCAAGCATCTTCAACCGTCGAGCAAATATAAATGCTAATCTGCAAGGGAAAGCCAGAAAAACTATAAG
TGATAGGTGGGAGAGTCAGCTGTGGAGAGAGAAAAAGTTTGGCTTAATAGATCACCTACACTACAGCCGT
GTTTATCCTGAAAGTATTCCACGGAAATTTATGTTTGAACACAGAAAGTTTCTTAGTGACCAGTATAATT
CTCAGCCTGCGAAATATGTACCACCAGAAGGAAGGCCCCCAAAACTTGATGATTTTAAGAGCGCCCGAAG
CCTTGGACATTTTGAAGTAACCATACTAGGTCTGAACCATGAGATAGCAATCGATGTTGCTTTCCTACCC
ATGTATTGTCCAGAAGATATTCGAACATCTCAAATAGACACACTGTTGACCTCCATGAATTACAGCTGTG
CATATCCACAGGACACAACTGGAAATGACCGATTGCCAGGTCCAAGAGCGGTTGCAGGTGATATTATAAA
AGCAGCAACTGAACTGGATAGAGTGCATATCGTCGGTATCTTGGATATCTGTAATTTGGGTAATAATAAA
GTGGAAGTCTATTTGCACAAGATTTATAGTCCAGAGAATACTTCTTAA

Translation (855 aa):
MSGESGQPEAGPSHAGLDWPNPERNRAGVPGGVIRRAGSQGPRSWIQKVLEQIMDSPRQCVTPSEVVPVT
VLAVQRYLLEDEPRDTVPKPPLYCYDVTISDGVYQEKCYLDPSLNSLVYQNILKVGIQMRISRVSCLYNE
KRIGQGILCIDNVHCGETSDSISLETPFRNRAHQEKPERPLRGGKSHYLALWNNEDPYGDIWLTDKQPEE
HNFSDTKIISLSHLEMTWTNRRNFPALLVRILHKSKLRYYGKPDKKMIEPYQTFLEVADSSGTVSVIMWN
ALCPEWYKSLRVGLVLLLQDYSVKKSYPFRIQPVPVDPQIKLISTMEICLNLRDPPTNIIIIPEKQVKPE
WRLPKLNHRFTTRSELDDMPENCICDVIGLLVFVGRVQRSKKKENREDFWSYRWIHIADGTSEQPFIVEL
FSTSQPEIFENIYPMAYFVCTQLKVVRNDNQVPKLLYLTTTNESGVFITGHRGQPYTYDAKVKNFIQWIR
TKSDSGEQKNMVIGGYYPYPPVPETFSKYSSSIKVESLLTAISEVRKEIEDLQYREQKRIAIQGIITAIK
YIPHSSATESASASETLRNANRPSTSQAARVEIQERNGKRHQDDEPVNSQYFQTTSTNLSLSNKIRILQG
PHANPVAVPQPGASVQTKGIKPGMPSIFNRRANINANLQGKARKTISDRWESQLWREKKFGLIDHLHYSR
VYPESIPRKFMFEHRKFLSDQYNSQPAKYVPPEGRPPKLDDFKSARSLGHFEVTILGLNHEIAIDVAFLP
MYCPEDIRTSQIDTLLTSMNYSCAYPQDTTGNDRLPGPRAVAGDIIKAATELDRVHIVGILDICNLGNNK
VEVYLHKIYSPENTS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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