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Report for CCDS31319.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31319.2 Public Homo sapiens 10 ADAM8 24 110 108 CCDS HistoryNCBI Gene:101Re-query CCDS DB by CCDS ID:31319.2Re-query CCDS DB by GeneID:101See the combined annotation on chromosome 10 in Sequence Viewer

Public Note for CCDS 31319.1
The 3' coding region has been updated to correct a 1 nt deletion versus the GRCh37 reference genome sequence, which results in a shorter protein C-terminus that is better supported by the available transcript and protein data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 31319.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000445355.8 ENSP00000453302.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000445355.8Link to Ensembl Protein Viewer:ENSP00000453302.1Re-query CCDS DB by Nucleotide ID:ENST00000445355Re-query CCDS DB by Protein ID:ENSP00000453302
Original member Current member NCBI NM_001109.5 NP_001100.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001109.5Link to Protein Sequence:NP_001100.3Re-query CCDS DB by Nucleotide ID:NM_001109Re-query CCDS DB by Protein ID:NP_001100Link to BLAST:NP_001100.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001100.3 824 P78325-1 824 100% 0 0

Chromosomal Locations for CCDS 31319.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 133263156 133263233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133263688 133263765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133267352 133267417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133267929 133268118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133268748 133268862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133269445 133269529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133269897 133269974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133270360 133270510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133270736 133270805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133270881 133271070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133271200 133271289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133271528 133271705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133271806 133271954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133272193 133272274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133272416 133272585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133272798 133272866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133272957 133273019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133273254 133273443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133273762 133273838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133273951 133274029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133274159 133274235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133275484 133275587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133276772 133276817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2475 nt):
ATGCGCGGCCTCGGGCTCTGGCTGCTGGGCGCGATGATGCTGCCTGCGATTGCCCCCAGCCGGCCCTGGG
CCCTCATGGAGCAGTATGAGGTCGTGTTGCCGTGGCGTCTGCCAGGCCCCCGAGTCCGCCGAGCTCTGCC
CTCCCACTTGGGCCTGCACCCAGAGAGGGTGAGCTACGTCCTTGGGGCCACAGGGCACAACTTCACCCTC
CACCTGCGGAAGAACAGGGACCTGCTGGGCTCCGGCTACACAGAGACCTATACGGCTGCCAATGGCTCCG
AGGTGACGGAGCAGCCTCGCGGGCAGGACCACTGCTTCTACCAGGGCCACGTAGAGGGGTACCCGGACTC
AGCCGCCAGCCTCAGCACCTGTGCCGGCCTCAGGGGTTTCTTCCAGGTGGGGTCAGACCTGCACCTGATC
GAGCCCCTGGATGAAGGTGGCGAGGGCGGACGGCACGCCGTGTACCAGGCTGAGCACCTGCTGCAGACGG
CCGGGACCTGCGGGGTCAGCGACGACAGCCTGGGCAGCCTCCTGGGACCCCGGACGGCAGCCGTCTTCAG
GCCTCGGCCCGGGGACTCTCTGCCATCCCGAGAGACCCGCTACGTGGAGCTGTATGTGGTCGTGGACAAT
GCAGAGTTCCAGATGCTGGGGAGCGAAGCAGCCGTGCGTCATCGGGTGCTGGAGGTGGTGAATCACGTGG
ACAAGCTATATCAGAAACTCAACTTCCGTGTGGTCCTGGTGGGCCTGGAGATTTGGAATAGTCAGGACAG
GTTCCACGTCAGCCCCGACCCCAGTGTCACACTGGAGAACCTCCTGACCTGGCAGGCACGGCAACGGACA
CGGCGGCACCTGCATGACAACGTACAGCTCATCACGGGTGTCGACTTCACCGGGACTACCGTGGGGTTTG
CCAGGGTGTCCGCCATGTGCTCCCACAGCTCAGGGGCTGTGAACCAGGACCACAGCAAGAACCCCGTGGG
CGTGGCCTGTACCATGGCCCATGAGATGGGCCACAACCTGGGCATGGACCATGATGAGAACGTCCAGGGC
TGCCGCTGCCAGGAACGCTTCGAGGCCGGCCGCTGCATCATGGCGGGCAGCATTGGCTCCAGTTTCCCCA
GGATGTTCAGTGACTGCAGCCAGGCCTACCTGGAGAGCTTTTTGGAGCGGCCGCAGTCGGTGTGCCTCGC
CAACGCCCCTGACCTCAGCCACCTGGTGGGCGGCCCCGTGTGTGGGAACCTGTTTGTGGAGCGTGGGGAG
CAGTGCGACTGCGGCCCCCCCGAGGACTGCCGGAACCGCTGCTGCAACTCTACCACCTGCCAGCTGGCTG
AGGGGGCCCAGTGTGCGCACGGTACCTGCTGCCAGGAGTGCAAGGTGAAGCCGGCTGGTGAGCTGTGCCG
TCCCAAGAAGGACATGTGTGACCTCGAGGAGTTCTGTGACGGCCGGCACCCTGAGTGCCCGGAAGACGCC
TTCCAGGAGAACGGCACGCCCTGCTCCGGGGGCTACTGCTACAACGGGGCCTGTCCCACACTGGCCCAGC
AGTGCCAGGCCTTCTGGGGGCCAGGTGGGCAGGCTGCCGAGGAGTCCTGCTTCTCCTATGACATCCTACC
AGGCTGCAAGGCCAGCCGGTACAGGGCTGACATGTGTGGCGTTCTGCAGTGCAAGGGTGGGCAGCAGCCC
CTGGGGCGTGCCATCTGCATCGTGGATGTGTGCCACGCGCTCACCACAGAGGATGGCACTGCGTATGAAC
CAGTGCCCGAGGGCACCCGGTGTGGACCAGAGAAGGTTTGCTGGAAAGGACGTTGCCAGGACTTACACGT
TTACAGATCCAGCAACTGCTCTGCCCAGTGCCACAACCATGGGGTGTGCAACCACAAGCAGGAGTGCCAC
TGCCACGCGGGCTGGGCCCCGCCCCACTGCGCGAAGCTGCTGACTGAGGTGCACGCAGCGTCCGGGAGCC
TCCCCGTCTTCGTGGTGGTGGTTCTGGTGCTCCTGGCAGTTGTGCTGGTCACCCTGGCAGGCATCATCGT
CTACCGCAAAGCCCGGAGCCGCATCCTGAGCAGGAACGTGGCTCCCAAGACCACAATGGGGCGCTCCAAC
CCCCTGTTCCACCAGGCTGCCAGCCGCGTGCCGGCCAAGGGCGGGGCTCCAGCCCCATCCAGGGGCCCCC
AAGAGCTGGTCCCCACCACCCACCCGGGCCAGCCCGCCCGACACCCGGCCTCCTCGGTGGCTCTGAAGAG
GCCGCCCCCTGCTCCTCCGGTCACTGTGTCCAGCCCACCCTTCCCAGTTCCTGTCTACACCCGGCAGGCA
CCAAAGCAGGTCATCAAGCCAACGTTCGCACCCCCAGTGCCCCCAGTCAAACCCGGGGCTGGTGCGGCCA
ACCCTGGTCCAGCTGAGGGTGCTGTTGGCCCAAAGGTTGCCCTGAAGCCCCCCATCCAGAGGAAGCAAGG
AGCCGGAGCTCCCACAGCACCCTAG

Translation (824 aa):
MRGLGLWLLGAMMLPAIAPSRPWALMEQYEVVLPWRLPGPRVRRALPSHLGLHPERVSYVLGATGHNFTL
HLRKNRDLLGSGYTETYTAANGSEVTEQPRGQDHCFYQGHVEGYPDSAASLSTCAGLRGFFQVGSDLHLI
EPLDEGGEGGRHAVYQAEHLLQTAGTCGVSDDSLGSLLGPRTAAVFRPRPGDSLPSRETRYVELYVVVDN
AEFQMLGSEAAVRHRVLEVVNHVDKLYQKLNFRVVLVGLEIWNSQDRFHVSPDPSVTLENLLTWQARQRT
RRHLHDNVQLITGVDFTGTTVGFARVSAMCSHSSGAVNQDHSKNPVGVACTMAHEMGHNLGMDHDENVQG
CRCQERFEAGRCIMAGSIGSSFPRMFSDCSQAYLESFLERPQSVCLANAPDLSHLVGGPVCGNLFVERGE
QCDCGPPEDCRNRCCNSTTCQLAEGAQCAHGTCCQECKVKPAGELCRPKKDMCDLEEFCDGRHPECPEDA
FQENGTPCSGGYCYNGACPTLAQQCQAFWGPGGQAAEESCFSYDILPGCKASRYRADMCGVLQCKGGQQP
LGRAICIVDVCHALTTEDGTAYEPVPEGTRCGPEKVCWKGRCQDLHVYRSSNCSAQCHNHGVCNHKQECH
CHAGWAPPHCAKLLTEVHAASGSLPVFVVVVLVLLAVVLVTLAGIIVYRKARSRILSRNVAPKTTMGRSN
PLFHQAASRVPAKGGAPAPSRGPQELVPTTHPGQPARHPASSVALKRPPPAPPVTVSSPPFPVPVYTRQA
PKQVIKPTFAPPVPPVKPGAGAANPGPAEGAVGPKVALKPPIQRKQGAGAPTAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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