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Report for CCDS9201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9201.1 Public Homo sapiens 12 RNF10 24 110 108 CCDS HistoryNCBI Gene:9921Re-query CCDS DB by CCDS ID:9201.1Re-query CCDS DB by GeneID:9921See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9201.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325954.9 ENSP00000322242.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325954.9Link to Ensembl Protein Viewer:ENSP00000322242.4Re-query CCDS DB by Nucleotide ID:ENST00000325954Re-query CCDS DB by Protein ID:ENSP00000322242
Original member Current member NCBI NM_014868.5 NP_055683.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014868.5Link to Protein Sequence:NP_055683.3Re-query CCDS DB by Nucleotide ID:NM_014868Re-query CCDS DB by Protein ID:NP_055683Link to BLAST:NP_055683.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055683.3 811 Q8N5U6-1 811 100% 0 0

Chromosomal Locations for CCDS 9201.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 120534812 120534968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120546405 120546601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120552499 120552698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120554718 120554808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120557282 120557466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120557546 120557682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120560726 120560886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120562945 120563070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120563347 120563623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120563810 120563943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120565072 120565189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120565428 120565529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120566825 120566980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120571191 120571291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120575631 120575688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120575792 120575950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120576590 120576666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2436 nt):
ATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGGCTCCAACAGCT
CCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAGCCGGCGA
GTCTAAACCCAAGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTTTCC
TACCCCAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACTTTTAACA
AGATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGA
TGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAAGAAGATCAACCTG
AACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGGACATGGTA
GCTGGGGAAAGAGGAACAAGTGGGGACATAAGCCTTTTAACAAGGAACTCTTTTTACAGGCCAACTGCCA
ATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCATTTTGCTGATCCTGATACATTAGTTAACTGGGAC
TTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTG
CAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGA
GAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCC
ACAGAGTCACATCAGTATGTTGTTGGTGATACCATTACGATGCAGCTGATGAAGAGGGAGAAAGGGGTGT
TGGTGGCTTTGCCCAAATCCAAATGGATGAATGTAGACCATCCCATTCATCTAGGAGATGAACAGCACAG
CCAGTACTCCAAGTTGCTGCTGGCCTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTA
GCACTAGAGCAGCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCCTGCTTTATTGAGGCAGCTATCCAGG
AGCTCAAGACTCGGGAAGAGGCTCTGTCGGGATTGGCCGGAAGCAGAAGGGAGGTCACTGGTGTTGTGGC
TGCTCTGGAACAACTGGTGCTGATGGCTCCCTTGGCGAAGGAGTCTGTTTTTCAACCCAGGAAGGGTGTG
CTGGAGTATCTGTCTGCCTTCGATGAAGAAACCACGGAAGTTTGTTCTCTGGACACTCCTTCTAGACCTC
TTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGTGTCTGAACCAGAGCCTGAGGGGTTGCCAGAGGCCTG
TGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGACCATTTGCACTGAGTCCAGCCAGCAGGAA
CCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTTTACCAAGCGGAAGATG
GACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGGCAGCCTGGAGAGGAG
CCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGTCTGAGGATGTTCGACAGCGT
CACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTTTGCAACCTCCTG
TGGTCTCTAAGGAAACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCAGCGCCAAAAGAA
GGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTACCCA
GAAGTCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCTCCTCTGATT
CTGCTTTGGGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGG
TTCCCATGCAGACTTTCTGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGCGTT
GGGAGTCTGGAAGAAGACTCTCCCTTCCCTTCCTTTGCCCAGATGCTGAGGGTTGGAAAAGCAAAAGCAG
ATGTGTGGCCCAAAACTGCTCCAAAGAAAGATGAGAACAGCTTAGTTCCTCCTGCCCCTGTGGACAGCGA
CGGGGAGAGTGATAATTCAGACCGTGTTCCTGTGCCCAGTTTTCAAAATTCCTTCAGCCAAGCTATTGAA
GCAGCCTTCATGAAACTGGACACACCAGCTACTTCAGATCCCCTCTCTGAAGAGAAAGGAGGAAAGAAAA
GAAAAAAACAGAAACAGAAGCTCCTGTTCAGCACCTCAGTCGTCCACACCAAGTGA

Translation (811 aa):
MPLSSPNAAATASDMDKNSGSNSSSASSGSSKGQQPPRSASAGPAGESKPKSDGKNSSGSKRYNRKRELS
YPKNESFNNQSRRSSSQKSKTFNKMPPQRGGGSSKLFSSSFNGGRRDEVAEAQRAEFSPAQFSGPKKINL
NHLLNFTFEPRGQTGHFEGSGHGSWGKRNKWGHKPFNKELFLQANCQFVVSEDQDYTAHFADPDTLVNWD
FVEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSVVA
TESHQYVVGDTITMQLMKREKGVLVALPKSKWMNVDHPIHLGDEQHSQYSKLLLASKEQVLHRVVLEEKV
ALEQQLAEEKHTPESCFIEAAIQELKTREEALSGLAGSRREVTGVVAALEQLVLMAPLAKESVFQPRKGV
LEYLSAFDEETTEVCSLDTPSRPLALPLVEEEEAVSEPEPEGLPEACDDLELADDNLKEGTICTESSQQE
PITKSGFTRLSSSPCYYFYQAEDGQHMFLHPVNVRCLVREYGSLERSPEKISATVVEIAGYSMSEDVRQR
HRYLSHLPLTCEFSICELALQPPVVSKETLEMFSDDIEKRKRQRQKKAREERRRERRIEIEENKKQGKYP
EVHIPLENLQQFPAFNSYTCSSDSALGPTSTEGHGALSISPLSRSPGSHADFLLTPLSPTASQGSPSFCV
GSLEEDSPFPSFAQMLRVGKAKADVWPKTAPKKDENSLVPPAPVDSDGESDNSDRVPVPSFQNSFSQAIE
AAFMKLDTPATSDPLSEEKGGKKRKKQKQKLLFSTSVVHTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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