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Report for CCDS21194.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21194.1 Public Mus musculus 7 Klk1b27 23 108 98 CCDS HistoryNCBI Gene:16619Re-query CCDS DB by CCDS ID:21194.1Re-query CCDS DB by GeneID:16619See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21194.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000079859.6 ENSMUSP00000078786.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000079859.6Link to Ensembl Protein Viewer:ENSMUSP00000078786.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000079859Re-query CCDS DB by Protein ID:ENSMUSP00000078786
Original member Current member NCBI NM_020268.3 NP_064664.1 Accepted alive Link to Nucleotide Sequence:NM_020268.3Link to Protein Sequence:NP_064664.1Re-query CCDS DB by Nucleotide ID:NM_020268Re-query CCDS DB by Protein ID:NP_064664Link to BLAST:NP_064664.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064664.1 263 Q9JM71 263 100% 0 0

Chromosomal Locations for CCDS 21194.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44052341 44052386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44054481 44054640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44055617 44055909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44056005 44056141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44056511 44056666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGAGGTTCCTGATCCTGTTCCTTGCCCTGTCCCTAGGAGGGATTGATGCTGCGCCTCCTGTCCAGTCTA
GAATAATTGGAGGATTTAAATGTAAGAAGAATTCTCAACCCTGGCATGTGGCTGTGCTCCGCTCCAACAA
ATATATATGCGGGGGAGTCCTGTTGGACCCCAACTGGGTTCTCACAGCTGCCCACTGCTATGGCAATGAC
ACCAGCCAGCATAATGTTTGGCTGGGCAAAAACAAGCTATTCCAACGTGAACCCTCTGCTCAGCACCGAT
GGGTCAGCAAAAGCTTCCCCCACCCTGACTACAACATGAGCCTCCTGAATGACCACATCCCACATCCTGA
GGACAAGAGCAATGACCTGATGCTGCTCCGTCTCAGCAAGCCTGCTGACATCACAGATGCTGTGAAGCCC
ATCGACCTGCCCACTGAGGAGCCCAAGCTGGGGAGCACATGCCTAGCCTCAGGCTGGGGCAGCATTACAC
CCACAAAATACCAAATCCCAAATGATCTTCAGTGTGTGTTCATCAAGCTCCTGCCCAATGAGAACTGTGC
CAAAGCCTACGTACATAAAGTCACAGATGTCATGCTGTGTGTAGGAGAGACGGGTGGAGGCAAAGGCACT
TGCAAGGGTGACTCAGGAGGCCCACTGATCTGTGATGGTGTTCTCCACGGTATCACATCATGGGGCTCTA
TCCCATGCGCTAAACCCAATGCGCCAGGCGTCTTCACAAAACTTATTAAGTTTACCTCCTGGATAAAAGA
CACTATGGCAAAAAACCCCTGA

Translation (263 aa):
MRFLILFLALSLGGIDAAPPVQSRIIGGFKCKKNSQPWHVAVLRSNKYICGGVLLDPNWVLTAAHCYGND
TSQHNVWLGKNKLFQREPSAQHRWVSKSFPHPDYNMSLLNDHIPHPEDKSNDLMLLRLSKPADITDAVKP
IDLPTEEPKLGSTCLASGWGSITPTKYQIPNDLQCVFIKLLPNENCAKAYVHKVTDVMLCVGETGGGKGT
CKGDSGGPLICDGVLHGITSWGSIPCAKPNAPGVFTKLIKFTSWIKDTMAKNP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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