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Report for CCDS50766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50766.1 Public Mus musculus 2 Necab3 23 108 98 CCDS HistoryNCBI Gene:56846Re-query CCDS DB by CCDS ID:50766.1Re-query CCDS DB by GeneID:56846See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50766.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000000895.12 ENSMUSP00000000895.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000000895.12Link to Ensembl Protein Viewer:ENSMUSP00000000895.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000000895Re-query CCDS DB by Protein ID:ENSMUSP00000000895
Original member Current member NCBI NM_021546.3 NP_067521.2 Accepted alive Link to Nucleotide Sequence:NM_021546.3Link to Protein Sequence:NP_067521.2Re-query CCDS DB by Nucleotide ID:NM_021546Re-query CCDS DB by Protein ID:NP_067521Link to BLAST:NP_067521.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067521.2 353 Q9D6J4-1 353 100% 0 0

Chromosomal Locations for CCDS 50766.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 154545139 154545167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154545255 154545346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154546026 154546103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154546228 154546340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154546670 154546723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154546801 154546880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154547037 154547155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154547425 154547561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154554647 154554744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154554900 154554925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154555584 154555692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154557057 154557081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154558738 154558839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGGCGTGCGCCGGGCTGCTTACTGTGTGCCTGCTCGGGCCACCTGCGCCCCAGCAGCCGCGACACTCTG
CGCCTGCCGCGGGACACGCGCTTTTCCAGGACGTTTTCCGAAGAGCAGACAAAAATGATGATGGTAAGCT
CTCGTTTGAAGAATTCCAGAATTACTTTGCTGATGGGGTTCTCAGCTCTGCGGAGCTGCGGGAACTGTTC
AGCGGCATCGATGATCATCTCACTGACAATTTAGAGACAGAGAAACTGTGTGACTACTTCTCCACACACC
TGGGTGTCTACCGGCCCGTGCTGGCTGCGCTGGAGTCTCTGAACCGTGCGGTGCTCACTGCCATGGACAC
TACAAAGCTGGAGTATGAACAGGCCTCCAAGGTGGACCAGTTTGTCACACGATTTCTGCTGCGGGAGACT
GTCAATCAGCTACAAGCCCTGCAGACCTCCCTGGAGGGAGCATCAGACACCCTGGAGGCGCAGGCCCATG
GCCAGCGGTTGGATGAAGAAACTATCAAAGCGCAGAGTAGGCCCTGTGGCAGCCGGAGGGCAGGACGCAG
AGCCCTAAGGAGCATCAGTTGGTCACCATCCTGGTCTCCTGGATCCTCTGATACAGGGCGGAGTTCAGAG
GCTGAGCAGCAGTGGCGGCTACAGGTCAACCGCCTCCAGGAGCTCATAGACCAGCTTGAGTGCAAGGCAC
CCCGGCTGGAACCCACACATGAGGAGGACCTCACCAAGGGGTTTGACTCGCACATCCTTGTGGCGCAGAG
GCAAGTGCAGGTGGCAGAGGATGCCCTGCAGGATTTTCATCGTGCTTTGTGCTGCTACATGAACTTCACA
GGGGCCCAAAGCCATTGTCTGCATGTGTCTGCCCAGAAGATGCTAGACAATGCTGCTTTCACCCTGTATG
AGTTCTGGCAGGATGAAGCCTCCTGGAGAAGGCACCAGCAGTCACCCTGCAGCAAGGCCTTCCAGCGCAC
CCTCATCGATCACCTGCAGGCCCCGGACACTCTCACCACTGTGTTCTTCCCAGCCTCCTGGTGGATTATG
AATAATAACTGA

Translation (353 aa):
MACAGLLTVCLLGPPAPQQPRHSAPAAGHALFQDVFRRADKNDDGKLSFEEFQNYFADGVLSSAELRELF
SGIDDHLTDNLETEKLCDYFSTHLGVYRPVLAALESLNRAVLTAMDTTKLEYEQASKVDQFVTRFLLRET
VNQLQALQTSLEGASDTLEAQAHGQRLDEETIKAQSRPCGSRRAGRRALRSISWSPSWSPGSSDTGRSSE
AEQQWRLQVNRLQELIDQLECKAPRLEPTHEEDLTKGFDSHILVAQRQVQVAEDALQDFHRALCCYMNFT
GAQSHCLHVSAQKMLDNAAFTLYEFWQDEASWRRHQQSPCSKAFQRTLIDHLQAPDTLTTVFFPASWWIM
NNN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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