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Report for CCDS20098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20098.1 Public Mus musculus 6 Zfp786 23 108 98 CCDS HistoryNCBI Gene:330301Re-query CCDS DB by CCDS ID:20098.1Re-query CCDS DB by GeneID:330301See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20098.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058844.5 ENSMUSP00000057495.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058844.5Link to Ensembl Protein Viewer:ENSMUSP00000057495.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000058844Re-query CCDS DB by Protein ID:ENSMUSP00000057495
Original member Current member NCBI NM_177882.4 NP_808550.1 Accepted alive Link to Nucleotide Sequence:NM_177882.4Link to Protein Sequence:NP_808550.1Re-query CCDS DB by Nucleotide ID:NM_177882Re-query CCDS DB by Protein ID:NP_808550Link to BLAST:NP_808550.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808550.1 777 Q8BV42 777 100% 0 0

Chromosomal Locations for CCDS 20098.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 47819669 47821701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 47825041 47825196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 47826962 47827088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 47830396 47830413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2334 nt):
ATGGCCGGACCCGCTCGGTTCCCACTGACTTTTGAAGATGTAGCCATTTACTTCTCTGAGCAAGAGTGGC
AACACTTAGAGGCCTGGCAGAAGGAACTTTACAAGCAAGTCATGAGAACCAATTACGAGACTCTCATCTC
TCTAGATAATGGACTGCCCAAACCAGAACTAATATCCTGGATTGAACTTGGGAGAGAGCTCTTCGGCAGC
TGGGGAGAAAAAAAGAAACCAGACAAAGAAACTCACTGCTCTATAGATGATGTGCATGTTCATCTAGCCA
TTGAGGAACAGTTACTTGAGAGTAGCCAGCGAGCTGTGAAATCAGAAGTCACATGCCACTCCCAGTTAAA
TCCTCTGGAGAGTCGGCATTCCTTTGGACTTGCTGTAGGAGAAAGGGTAGATGCTTCCCTCAGACATGAT
CAAGGCATCAGTCTTGTAAACGCACAAACACGCTGTGGTGAGGCTGTTGTTTCAGTGGTGCATAGCTCCA
GTGAGGCTGCCCAAAGAAAAGTACTCTCAAGTCACAGAACTCTGGCTCTCCCTGGCTTGCAGAGAGTTTC
CTCTTGGCAGAGTACCCAGAACTCTTGTCCAGTCTGTAGGGAAAACTCTTGGGAGAAGAATCACTTAGTG
AAGCAACAGAAGGGCCACTCAAAGAGCCGGTCATATAGGGTCTGGAAGAAGTTCAGCAGACAGGCTGATG
CTAAACAGCCTTGGAGCATCTCATGTCTCGGATGTGGGAAGAGCTTCCGCCTAAAGCAGTACTTGGTGAG
ACATCTAGATATCCACACAAGGAAGAGACCACCCCAGTGCCCTAAGTGCAAAATGTGCTTCCATCATGAA
CGTACCCTTTTCAGCCACCACCTGAAGAACAGTTCTTCCCAGCACCCCACATGTGACACGAGCTTCCGGA
CAGATAGCAGTGTTGACCTGTGCCAGCAGATTCAAGAGAGGCCAGCCTTCTGGAGAGAAGACACCAACGT
GCCCTCAAGACAGAAGCCGGGTCCCAGTCTGGACTGTGAGGACTGCTGCCACATGGGTAGCAAGCTGAAG
GGCCTGCAGTGTGGCTGCATCCTAGGTGAGGACAGACCCCACTCACACACAGAGTATGGCAATTGCTTCC
TCTCACAGTCGAAGCAGGCAGGTCTCTGCAGGACACACACAGGAGAAAAAGCCTCTCAGTGTCCAGAAAG
CAACAAGCGCCTCTGCCTGAGAGGCCTACAGAATGTCCACCAACATGGGCTTCGTGGAGAAAAACCAGTC
TTCTGTAGAAAGTGTGGTCAAGGATTCACCAAGCATTGCGGACTCACAGAACACACCCGAATCCTCAGCG
GGGAGAAATCTTTCTGGTGTGCCCAGTGTGGAAGGAACTTCAGCCAAAAGGGACAGCTGCTGAGGCACCA
GCGGCTTCACTTAGAGGAAAAACCCTTCCAATGCACAATGTGTGAGTTGCGCTTCCATCTGAAGAGCAGG
TTGAGGGCCCACCAACTACAACATGGTGGAGAAAGGCCATTCTCCTGCAGTGAGTGTGGCCGAGCCTTCA
CCCATCAGTGCAAGCTCCGTGAGCATCTGCGAGTGCACAGTGGAGAGAGGCCCTTTCAGTGTCCCGAATG
CCACAAGAGCTTCCGCCTGAAGGGCGTCCTGAAGGCCCATCAGCGCATCCACAGCAAGGAGAGGCCATTC
TCCTGCGGGGAATGTGGCAAGGGCTTTATAAGACAGTCTAAGCTCACAGAGCACTTCCGCGTCCACAGTG
GAGAGAGGCCCTTCCAGTGTCCTGAGTGTGACAGGCGCTTTCGCCTAAAGGGGCAGCTGCTTAGCCATCA
GCGCCTACACACAGGAGAGAGACCCTTCCAGTGCCCGGAGTGTGGCAAGAGCTACCGTGTGAAGGCTGAC
ATGAAGGCGCACCAGCTGCTGCATGGCGGGCAGATGCCGTTCTCTTGCCAGTGTGGAAAGGGCTTTGCCA
AGCAATCTAAACTCGTGGAACACATGAGGACACATACAGGAGAGAAGCCTTTTCAGTGTCCCAAGTGCGA
CAAGAGCTTCCGATTGAAAGCTCAGCTCCTCAGCCACCAGGGCCTGCACACAGGCGAGAGACCTTTCCAC
TGCCCTGAATGTGATAAAAACTTCCGGGAAAAGGGTCACATGCTCAGGCACCAGCGCATCCACAGGCCCG
AGCGGCCCTTTGCCTGCGGTGACTGTGGAAAGGGCTTCATTTATAAGTCCAAACTGGCTGAGCACATCCG
AGTACACACAAAGGCCTGCCAGGTGCCACGTGAACCTGACATTAAGAAAAGGCTTAGCCAACTGTTTGCA
ATGATAGAGGCTGACTGGAGTTGA

Translation (777 aa):
MAGPARFPLTFEDVAIYFSEQEWQHLEAWQKELYKQVMRTNYETLISLDNGLPKPELISWIELGRELFGS
WGEKKKPDKETHCSIDDVHVHLAIEEQLLESSQRAVKSEVTCHSQLNPLESRHSFGLAVGERVDASLRHD
QGISLVNAQTRCGEAVVSVVHSSSEAAQRKVLSSHRTLALPGLQRVSSWQSTQNSCPVCRENSWEKNHLV
KQQKGHSKSRSYRVWKKFSRQADAKQPWSISCLGCGKSFRLKQYLVRHLDIHTRKRPPQCPKCKMCFHHE
RTLFSHHLKNSSSQHPTCDTSFRTDSSVDLCQQIQERPAFWREDTNVPSRQKPGPSLDCEDCCHMGSKLK
GLQCGCILGEDRPHSHTEYGNCFLSQSKQAGLCRTHTGEKASQCPESNKRLCLRGLQNVHQHGLRGEKPV
FCRKCGQGFTKHCGLTEHTRILSGEKSFWCAQCGRNFSQKGQLLRHQRLHLEEKPFQCTMCELRFHLKSR
LRAHQLQHGGERPFSCSECGRAFTHQCKLREHLRVHSGERPFQCPECHKSFRLKGVLKAHQRIHSKERPF
SCGECGKGFIRQSKLTEHFRVHSGERPFQCPECDRRFRLKGQLLSHQRLHTGERPFQCPECGKSYRVKAD
MKAHQLLHGGQMPFSCQCGKGFAKQSKLVEHMRTHTGEKPFQCPKCDKSFRLKAQLLSHQGLHTGERPFH
CPECDKNFREKGHMLRHQRIHRPERPFACGDCGKGFIYKSKLAEHIRVHTKACQVPREPDIKKRLSQLFA
MIEADWS


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