NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS26927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26927.1 Public Mus musculus 14 Gdf10 23 108 98 CCDS HistoryNCBI Gene:14560Re-query CCDS DB by CCDS ID:26927.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26927.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168727.2 ENSMUSP00000128621.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168727.2Link to Ensembl Protein Viewer:ENSMUSP00000128621.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168727Re-query CCDS DB by Protein ID:ENSMUSP00000128621
Original member Current member NCBI NM_145741.3 NP_665684.2 Accepted alive Link to Nucleotide Sequence:NM_145741.3Link to Protein Sequence:NP_665684.2Re-query CCDS DB by Nucleotide ID:NM_145741Re-query CCDS DB by Protein ID:NP_665684Link to BLAST:NP_665684.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_665684.2 476 P97737 476 100% 0 0

Chromosomal Locations for CCDS 26927.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 33923896 33924202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 33931845 33932776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 33934322 33934513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGGCTCCAGGTCCTGCTCGGATCAGCTTGGGGTCCCAGCTGCTGCCCATGGTGCCGCTGCTCCTGCTGC
TGCGGGGCGCAGGCTGCGGCCACAGGGGCCCCTCATGGTCCTCATTGCCCTCGGCAGCTGCCGGTCTGCA
GGGGGACAGGGACTCCCAGCAGTCACCCGGGGACGCAGCAGCCGCTCTGGGCCCAGGCGCCCAGGACATG
GTCGCTATCCACATGCTCAGGCTCTATGAGAAGTACAACCGAAGAGGTGCTCCACCGGGAGGAGGCAACA
CCGTCCGAAGCTTCCGTGCCCGGCTGGAAATGATCGACCAAAAGCCTGTGTATTTCTTCAACTTGACTTC
CATGCAAGACTCAGAAATGATCCTCACAGCCGCCTTCCACTTCTACTCAGAACCTCCACGGTGGCCCCGG
GCTCGTGAGGTATTCTGCAAGCCCCGAGCTAAGAACGCATCCTGCCGCCTCCTGACCCCAGGGCTGCCTG
CACGCTTGCACCTAATCTTCCGCAGTCTTTCCCAGAACACCGCCACTCAGGGGCTGCTCCGCGGGGCCAT
GGCCCTGACGCCTCCACCACGTGGCCTGTGGCAGGCCAAGGACATCTCCTCAATCATCAAGGCTGCCCGA
AGGGATGGAGAGCTGCTTCTCTCTGCTCAGCTGGATACTGGGGAGAAGGACCCCGGAGTGCCACGGCCCA
GTTCCCACATGCCCTATATCCTTGTCTACGCCAATGACCTGGCCATCTCCGAACCCAACAGTGTAGCAGT
GTCGCTACAGAGATACGACCCATTTCCAGCTGGAGACTTTGAGCCTGGAGCAGCCCCCAACAGCTCAGCT
GATCCCCGCGTGCGCAGGGCGGCTCAGGTGTCAAAACCCCTGCAAGACAATGAACTGCCGGGGCTGGATG
AAAGACCAGCGCCTGCCCTGCATGCCCAGAATTTCCACAAGCACGAGTTCTGGTCCAGTCCTTTCCGGGC
ACTGAAACCCCGCACGGGGCGCAAAGACCGCAAGAAGAAGGACCAGGACACATTCACCGCCGCCTCCTCT
CAGGTGCTGGACTTTGACGAGAAGACGATGCAGAAAGCCAGGAGGCGGCAGTGGGATGAGCCCCGGGTCT
GCTCCAGGAGGTACCTGAAGGTGGATTTTGCAGACATCGGGTGGAATGAATGGATCATCTCTCCCAAATC
CTTTGACGCCTACTACTGTGCTGGGGCCTGCGAGTTCCCCATGCCCAAGATTGTCCGCCCATCCAACCAT
GCCACCATCCAGAGCATCGTCAGAGCTGTGGGCATTGTCCCTGGCATCCCAGAGCCATGCTGTGTTCCAG
ACAAGATGAACTCCCTTGGAGTCCTTTTCCTGGATGAAAATCGGAATGCGGTTCTGAAGGTGTACCCCAA
TATGTCCGTAGAGACCTGTGCCTGTCGGTAA

Translation (476 aa):
MAPGPARISLGSQLLPMVPLLLLLRGAGCGHRGPSWSSLPSAAAGLQGDRDSQQSPGDAAAALGPGAQDM
VAIHMLRLYEKYNRRGAPPGGGNTVRSFRARLEMIDQKPVYFFNLTSMQDSEMILTAAFHFYSEPPRWPR
AREVFCKPRAKNASCRLLTPGLPARLHLIFRSLSQNTATQGLLRGAMALTPPPRGLWQAKDISSIIKAAR
RDGELLLSAQLDTGEKDPGVPRPSSHMPYILVYANDLAISEPNSVAVSLQRYDPFPAGDFEPGAAPNSSA
DPRVRRAAQVSKPLQDNELPGLDERPAPALHAQNFHKHEFWSSPFRALKPRTGRKDRKKKDQDTFTAASS
QVLDFDEKTMQKARRRQWDEPRVCSRRYLKVDFADIGWNEWIISPKSFDAYYCAGACEFPMPKIVRPSNH
ATIQSIVRAVGIVPGIPEPCCVPDKMNSLGVLFLDENRNAVLKVYPNMSVETCACR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH