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Report for CCDS17203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17203.1 Public Mus musculus 2 Ptk6 23 108 98 CCDS HistoryNCBI Gene:20459Re-query CCDS DB by CCDS ID:17203.1Re-query CCDS DB by GeneID:20459See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016511.5 ENSMUSP00000016511.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016511.5Link to Ensembl Protein Viewer:ENSMUSP00000016511.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000016511Re-query CCDS DB by Protein ID:ENSMUSP00000016511
Original member Current member NCBI NM_009184.2 NP_033210.1 Accepted alive Link to Nucleotide Sequence:NM_009184.2Link to Protein Sequence:NP_033210.1Re-query CCDS DB by Nucleotide ID:NM_009184Re-query CCDS DB by Protein ID:NP_033210Link to BLAST:NP_033210.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033210.1 451 Q64434 451 100% 0 0

Chromosomal Locations for CCDS 17203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 181195769 181195956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181196301 181196454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181196945 181197126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181198380 181198541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181199077 181199230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181199599 181199762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181200131 181200252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181202275 181202504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1356 nt):
ATGGTGTCTTGGGACAAGGCTCACCTGGGTCCTAAGTATGTGGGCCTCTGGGACTTCAAGGCACGGACAG
ATGAGGAGCTGAGCTTTCAGGCAGGAGACCTCCTCCATGTTACCAAGAAGGAGGAACTGTGGTGGTGGGC
CACCCTGCTGGATGCAGAAGGCAAGGCCTTGGCTGAGGGCTATGTGCCTCACAACTACCTGGCTGAGAAG
GAAACTGTGGAGTCTGAACCGTGGTTCTTTGGTTGCATCTCCCGCTCAGAGGCCATGCACAGGCTGCAGG
CTGAGGACAACTCGAAGGGTGCCTTCCTGATCAGAGTCAGCCAGAAGCCAGGAGCAGACTATGTCCTCTC
TGTCCGGGATGCTCAGGCCGTGCGACATTACAGGATCTGGAAGAACAACGAGGGCCGGCTGCACCTGAAT
GAGGCGGTATCCTTCTCCAATCTGTCTGAGCTTGTGGACTACCATAAGACCCAGAGCCTGTCTCATGGCC
TACAGCTGTCCATGCCCTGCTGGAAGCACAAAACTGAGCCCTTGCCCCACTGGGATGACTGGGAGAGGCC
GAGGGAGGAGTTCACACTCTGTAAGAAGCTGGGGGCCGGCTACTTTGGGGAGGTCTTTGAAGCGCTCTGG
AAAGGCCAGGTCCATGTGGCTGTGAAGGTGATCTCTAGAGACAATCTCCTGCACCAGCACACCTTCCAGG
CTGAGATTCAGGCCATGAAGAAGCTGCGGCACAAGCACATCCTGTCACTGTACGCTGTGGCGACTGCAGG
GGACCCGGTCTACATCATCACGGAGCTCATGCCCAAGGGGAACCTGCTGCAGCTACTGCGTGACTCTGAT
GAGAAAGCCCTGCCTATTTTGGAGCTGGTGGACTTTGCATCACAGGTTGCTGAGGGCATGTGCTACCTGG
AATCTCAGAATTACATCCACCGTGACCTGGCTGCAAGGAACGTTCTTGTTACAGAGAACAATCTCTGCAA
AGTGGGGGACTTTGGGCTTGCCAGGCTTGTCAAGGAGGACATCTACCTTTCCCATGAGCACAATGTCCCC
TACAAATGGACAGCACCTGAGGCACTTTCCCGAGGGCATTACTCCATCAAGTCTGATGTCTGGTCTTTTG
GAGTTCTTCTTCATGAAATTTTCAGCAGGGGGCAGATGCCCTACCCAGGCATGTCCAATCATGAAACCTT
CCTGAGGGTGGATGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCACCCAACATACACAAGCTGATG
CTCAGCTGCTGGAGCAGAGACCCCAAGCAGAGACCTTGCTTCAAAGACCTGTGTGAGAAACTCACAGGTA
TCACCAGGTATGAGAACCTGGTCTGA

Translation (451 aa):
MVSWDKAHLGPKYVGLWDFKARTDEELSFQAGDLLHVTKKEELWWWATLLDAEGKALAEGYVPHNYLAEK
ETVESEPWFFGCISRSEAMHRLQAEDNSKGAFLIRVSQKPGADYVLSVRDAQAVRHYRIWKNNEGRLHLN
EAVSFSNLSELVDYHKTQSLSHGLQLSMPCWKHKTEPLPHWDDWERPREEFTLCKKLGAGYFGEVFEALW
KGQVHVAVKVISRDNLLHQHTFQAEIQAMKKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSD
EKALPILELVDFASQVAEGMCYLESQNYIHRDLAARNVLVTENNLCKVGDFGLARLVKEDIYLSHEHNVP
YKWTAPEALSRGHYSIKSDVWSFGVLLHEIFSRGQMPYPGMSNHETFLRVDAGYRMPCPLECPPNIHKLM
LSCWSRDPKQRPCFKDLCEKLTGITRYENLV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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