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Report for CCDS40157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40157.1 Public Mus musculus 7 Cuzd1 23 108 98 CCDS HistoryNCBI Gene:16433Re-query CCDS DB by CCDS ID:40157.1Re-query CCDS DB by GeneID:16433See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 40157.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046611.8 ENSMUSP00000037168.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046611.8Link to Ensembl Protein Viewer:ENSMUSP00000037168.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000046611Re-query CCDS DB by Protein ID:ENSMUSP00000037168
Original member Current member NCBI NM_008411.3 NP_032437.3 Accepted alive Link to Nucleotide Sequence:NM_008411.3Link to Protein Sequence:NP_032437.3Re-query CCDS DB by Nucleotide ID:NM_008411Re-query CCDS DB by Protein ID:NP_032437Link to BLAST:NP_032437.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032437.3 607 P70412 607 100% 0 0

Chromosomal Locations for CCDS 40157.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 131308741 131308913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131309598 131309866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131311505 131311896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131314739 131314911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131316053 131316270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131316608 131316758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131317938 131318152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131320039 131320189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131321966 131322047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1824 nt):
ATGGAGGTCACTGGAAGGCTGTTCATCTGGGCTATTTTAGCTGTCTCCTGTGGGGCACAGCTGAATTCTA
CAGAGGCTGAAGGCAAATCAAGATGCACAGCCAGTCTGGGAGGGGCCAATCTGGGAGAGACCCATAAAGC
CCTGGTCCTACAGCTCAGTGCGAATGAGAACTGCACTTGGACCATAGAGAGACCTGAAAACAGGAGCATC
AGAATCATCTTCTCCTACATCAAGTTGGATCCAGGCAGCAGGTGTGAAACTGAAAACATTAAGGTGTTTG
ATGGAAGCTCCACCAGTGGGCCTCTGCTAGGGAAGGCCTGCAGCAGAAATGATTTCGTGCCTGTGTTTGA
ATCATCATCCAACTCGATGACATTTCAGATAGTCACTGGCTTGACAAAGTTCCCAAGGAGTGTCTTTATC
TTCTACTATTTTTTCTCCGCTGCTACCGTTATTCCAAACTGCGGTGGTGACCTGCGAGCATTGGAAGGGT
CCTTCAGCAGCCCCAATTATCCAAAGCCGCACCCTGAGCTGGCATATTGTGTCTGGCACATACAAGTGGG
GAAAGGCTATAAGATACAATTGAAGTTTACAGATCTCTTACTAGAGATGGATGAAAACTGCAAGTTTGAT
TTCATCGCAGTCTACGATGGCCCCTCCACCACGGCAGGCCTGCTCAAACAACTCTGCGGCCGTGGGAAGC
CTACCTTAGAATCTTCCTCTGACGCCATGACTGTCGTGCTATCTACAGATTATGCCAATTCCTACAAAGG
CTTTTCTGCTTCCTACACTTCAATTTACATCCACGATGTCAACACTACATCTCTAAGTTGTGTTTCTGAC
AAGATGAGAGTCATCATAAGCAAATCATACCTACCGGCACTCAACTACAATGAGAGCAATTTGCAGCTAA
ATGACCCAACTTGCAGACCGAATGTATCAAATGTCATAGAGTTCTCTATCCCTCTGCACGAATGCGGTAC
AGTCAAAAAGATAGAGGACCACGCGATCAGCTATACCAACAGGATCACCTTCATCGAGTCTCCGGTCTCT
GCTGTGATCACCCGACAGAAGCTCCTCCAGATCGTGGTGACCTGTGAGATGGAGTATAACTCTACCGTGG
AGATTATGTACATAACTGAAGACGACATCATACAGAACCAGAGTGTCCTGGGCAAATACAACACCAGCCT
GGCTCTCTATGAGTCCGACTCATTTGAAAACCTCGTACAGGAGTCACCATATTATGTAGACTTGAACCAG
ACTCTCTTTGTCCAAGCCACCTTGCACACCTCGGATCCAAGCCTGGTGGTGTTTCTGGATACTTGCAGAG
CCTCGCCTACGTCTGACTTTGCATCTCCAACCTACGACTTAATCAGCAGCGGATGTTGTCAAGATGAGAC
CTGTAAGGTGTATCCCTTATTTGGGCACTATGGAAGGTTCCAGTTTAATGCCTTTAAATTCTTGAAACAT
CTCAACTCTGTGTATCTCAAGTGTAAGATTTTGATATGTGATAACAATGACCAAACATCTCGCTGCAATC
AAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTCCTACAAATGGAAGACTGACTCTGTTATAGGACC
CATTCGCCTGAAGAGGGACCGAAGTGCAAGTAGAGATTCAGGACTTCTGCCTCAAATACATGAAGCAGAA
ATTTCAAACCAGCCCCTCAGTCGCCTGTACCTGTTTTCCTTCATGGTTCTTGCGCTAAATGTGGTGATTG
TGGCGATAACCACAGTGAAGCATTTCCTAAATCGGTGGATGGATCACAGATACCAGAAGCTGCAGGTCTA
CTAG

Translation (607 aa):
MEVTGRLFIWAILAVSCGAQLNSTEAEGKSRCTASLGGANLGETHKALVLQLSANENCTWTIERPENRSI
RIIFSYIKLDPGSRCETENIKVFDGSSTSGPLLGKACSRNDFVPVFESSSNSMTFQIVTGLTKFPRSVFI
FYYFFSAATVIPNCGGDLRALEGSFSSPNYPKPHPELAYCVWHIQVGKGYKIQLKFTDLLLEMDENCKFD
FIAVYDGPSTTAGLLKQLCGRGKPTLESSSDAMTVVLSTDYANSYKGFSASYTSIYIHDVNTTSLSCVSD
KMRVIISKSYLPALNYNESNLQLNDPTCRPNVSNVIEFSIPLHECGTVKKIEDHAISYTNRITFIESPVS
AVITRQKLLQIVVTCEMEYNSTVEIMYITEDDIIQNQSVLGKYNTSLALYESDSFENLVQESPYYVDLNQ
TLFVQATLHTSDPSLVVFLDTCRASPTSDFASPTYDLISSGCCQDETCKVYPLFGHYGRFQFNAFKFLKH
LNSVYLKCKILICDNNDQTSRCNQGCVPRRKRDIPSYKWKTDSVIGPIRLKRDRSASRDSGLLPQIHEAE
ISNQPLSRLYLFSFMVLALNVVIVAITTVKHFLNRWMDHRYQKLQVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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