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Report for CCDS41192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41192.1 Public Mus musculus X Eif1ax 23 108 98 CCDS HistoryNCBI Gene:66235Re-query CCDS DB by CCDS ID:41192.1Re-query CCDS DB by GeneID:66235See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41192.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087143.6 ENSMUSP00000084387.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087143.6Link to Ensembl Protein Viewer:ENSMUSP00000084387.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000087143Re-query CCDS DB by Protein ID:ENSMUSP00000084387
Original member Current member NCBI NM_025437.5 NP_079713.2 Accepted alive Link to Nucleotide Sequence:NM_025437.5Link to Protein Sequence:NP_079713.2Re-query CCDS DB by Nucleotide ID:NM_025437Re-query CCDS DB by Protein ID:NP_079713Link to BLAST:NP_079713.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079713.2 144 Q8BMJ3 144 100% 0 0

Chromosomal Locations for CCDS 41192.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 159372400 159372415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 159376381 159376464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 159377459 159377562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 159378539 159378589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 159379730 159379811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 159382688 159382779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 159385408 159385413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGCCCAAGAATAAAGGAAAAGGAGGCAAAAACCGGCGTAGAGGCAAAAATGAGAATGAATCTGAAAAGC
GAGAGCTTGTGTTCAAGGAGGATGGGCAAGAATATGCTCAAGTAATCAAAATGTTGGGAAACGGACGATT
AGAAGCCATGTGTTTTGATGGTGTAAAGAGACTGTGCCACATCAGAGGGAAATTGAGAAAAAAGGTTTGG
ATAAATACCTCAGATATCATATTGGTGGGGCTACGAGATTACCAGGACAACAAAGCCGATGTCATTTTAA
AATACAACGCAGATGAAGCTAGAAGTCTCAAGGCCTATGGCGAGCTTCCAGAGCATGCTAAAATCAATGA
AACTGATACATTTGGTCCTGGAGATGATGATGAAATTCAGTTTGATGACATTGGGGATGATGATGAAGAC
ATCGATGATATCTAA

Translation (144 aa):
MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVW
INTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDED
IDDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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