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Report for CCDS24822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24822.1 Public Mus musculus 11 Adora2b 23 108 98 CCDS HistoryNCBI Gene:11541Re-query CCDS DB by CCDS ID:24822.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24822.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018644.2 ENSMUSP00000018644.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018644.2Link to Ensembl Protein Viewer:ENSMUSP00000018644.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000018644Re-query CCDS DB by Protein ID:ENSMUSP00000018644
Original member Current member NCBI NM_007413.4 NP_031439.2 Accepted alive Link to Nucleotide Sequence:NM_007413.4Link to Protein Sequence:NP_031439.2Re-query CCDS DB by Nucleotide ID:NM_007413Re-query CCDS DB by Protein ID:NP_031439Link to BLAST:NP_031439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031439.2 332 Q60614 332 100% 0 0

Chromosomal Locations for CCDS 24822.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62249102 62249436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62265062 62265725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGCAGCTAGAGACGCAAGACGCGCTGTACGTGGCGCTGGAGCTGGTTATCGCTGCGCTGGCGGTGGCGG
GC
AACGTGCTGGTGTGCGCCGCGGTGGGAGCCTCGAGTGCATTACAGACCCCCACCAACTACTTTCTGGT
A
TCCCTGGCGACGGCAGACGTGGCCGTGGGACTCTTCGCCATCCCCTTTGCCATCACCATCAGCTTGGGC
TTC
TGCACGGACTTCCACGGCTGCCTCTTCCTCGCCTGCTTCGTGCTGGTGCTCACACAGAGCTCCATCT
TT
AGCCTCTTGGCGGTGGCTGTCGACCGATATCTGGCCATTCGCGTCCCGCTCAGGTATAAAGGTTTGGT
C
ACTGGGACACGAGCGAGAGGGATCATTGCTGTCCTCTGGGTCCTTGCCTTTGGCATTGGATTGACTCCG
TTC
CTGGGGTGGAACAGTAAAGACAGTGCCACCAGCAACTGCACAGAACTGGGGGATGGCATCGCGAATA
AA
AGCTGCTGTCCTGTGACATGTCTCTTTGAGAATGTGGTCCCCATGAGCTACATGGTGTATTTCAACTT
C
TTTGGGTGTGTCCTTCCTCCACTGCTCATAATGCTGGTGATCTACATCAAAATCTTCATGGTGGCCTGC
AAG
CAGCTTCAGCGCATGGAACTGATGGACCACTCCAGGACCACTCTCCAGCGGGAGATCCACGCAGCCA
AG
TCACTGGCTATGATCGTGGGCATTTTTGCTCTGTGTTGGCTCCCAGTGCATGCCATCAACTGTATCAC
C
CTCTTCCATCCAGCCCTGGCCAAGGACAAGCCCAAGTGGGTGATGAATGTGGCCATCCTCCTGTCACAT
GCC
AATTCAGTTGTCAACCCCATTGTCTATGCCTACAGGAACCGAGACTTCCGCTACAGTTTCCACAAGA
TC
ATCTCCAGATATGTTCTCTGCCAGGCCGAGACCAAGGGTGGGAGTGGGCAGGCTGGGGCGCAGTCTAC
T
CTCAGTCTGGGCTTATGA


Translation (332 aa):
MQLETQDALYVALELVIAALAVAGNVLVCAAVGASSALQTPTNYFLVSLATADVAVGLFAIPFAITISLG
F
CTDFHGCLFLACFVLVLTQSSIFSLLAVAVDRYLAIRVPL
RYKGLVTGTRARGIIAVLWVLAFGIGLTP
F
LGWNSKDSATSNCTELGDGIANKSCCPVTCLFENVVPMSYMVYFNFFGCVLPPLLIMLVIYIKIFMVAC
K
QLQRMELMDHSRTTLQREIHAAKSLAMIVGIFALCWLPVHAINCITLFHPALAKDKPKWVMNVAILLSH
A
NSVVNPIVYAYRNRDFRYSFHKIISRYVLCQAETKGGSGQAGAQSTLSLGL




Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser