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Report for CCDS20792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20792.1 Public Mus musculus 7 Zik1 23 108 98 CCDS HistoryNCBI Gene:22775Re-query CCDS DB by CCDS ID:20792.1Re-query CCDS DB by GeneID:22775See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20792.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032551.7 ENSMUSP00000032551.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032551.7Link to Ensembl Protein Viewer:ENSMUSP00000032551.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000032551Re-query CCDS DB by Protein ID:ENSMUSP00000032551
Original member Current member NCBI NM_009577.3 NP_033603.2 Accepted alive Link to Nucleotide Sequence:NM_009577.3Link to Protein Sequence:NP_033603.2Re-query CCDS DB by Nucleotide ID:NM_009577Re-query CCDS DB by Protein ID:NP_033603Link to BLAST:NP_033603.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033603.2 463 Q80YP6 463 100% 0 0

Chromosomal Locations for CCDS 20792.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 10489777 10491008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 10492279 10492405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 10494490 10494522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGACTGCAGAAATGGATATGGCCCTCATGCAGGGCTGTGTGACCTTTCAAGATGTGGCCATTTGCTTCT
CCCATGAAGAATGGAGACTTCTTGATGAGACTCAGAGGCTCCTGTACCTCAGTGTTATGCTGCAGAACTT
TGCACTCATAAACTCCCAGGGTTGTGGGCATAAAACAGAAGATGAAGAGCGAAGGGTTTCTACACGAGCG
TCAAAGGGTTTGAGATCCGAGACCACACCGAAAACTAACCTCTGTGAAAAGTGTGTCCCGATTCTGCAAG
ACATTTTGTGCCTGCCTGGTCTACCTGGGCAGAAACATAGTACAGAGGCAAGTTCAAAAGTTGATCAGCA
CCAAGACCATAATAGTACAGGAAAACCCTTGGAGAAGAATGCTGACAGGTCTTCATACCTGTTCTACCTG
TCAGCAAAGTCCTTCCCCAGTTGGGATGTTGAAAAAGACCTCCCAGATATACTGAGCCTTCTGAAGTCTC
AGGTCTGTCCCAAAACTAAGAAGTACAGAAAAAGCACTGAGGGTAGGAAAGAAACAAGTCATGAAAGTGA
CAAGTCAGAAGAGTGTCAGAGCCTTTCCAGTCAAAAGCAAACACTTGCTCACCACCCAAAAACCTCCAAT
GGAAAGAAACTTTATGAGTGCAGCAAATGTGGAAAGACCTTCCGTGGCAAATACTCCCTTGATCAACATC
AGAGAGTCCACACCGGAGAGAGGCCTTGGGAGTGTAGAGATTGTGGGAAATTCTTTAGCCAGACCTCCCA
CCTGAATGATCACCGTAGAATACACACTGGAGAGAGGCCTTATGAGTGCAGTGAATGTGGGAAATTATTT
AGACAGAACTCCAGTCTTGTTGATCACCAGAAAACTCATACTGGAGCAAGACCATATGAGTGTAGCCAGT
GTGGGAAGTCCTTTAGTCAAAAAGCTACACTTGTTAAACACAAGAGAGTTCACACTGGAGAAAGGCCTTA
CAAGTGTAGTGAGTGTGGGAATTCCTTTAGTCAAAGTGCCATTCTTAACCAACACCGGAGAATTCACACT
GGAGTAAAGCCTTATGAATGTAGAGAATGTGGGAAATCTTTTAGCCAAAAAGCTACCCTTATTAAACACC
AGCGAGTTCACACTGGAGAAAGGCCTTACAAGTGTAGTGAGTGTGGGAAATCTTTCAGTCAAAGCTCCAT
CCTTATTCAACACCGGAGAATTCATACAGGAGCAAGGCCCTATGAGTGTAGCCAGTGTGGAAAGTCCTTT
AGCCAAAAGTCCGGTCTCATTCAGCATCAGGTAGTTCACACTGGAGAAAGGCCATATGAATGTGACACAT
GTGGGAATTCTTTTAGTCAGTGCTCTAGCCTCATTCATCACCAAAAATGTCATAACGCTTAA

Translation (463 aa):
MTAEMDMALMQGCVTFQDVAICFSHEEWRLLDETQRLLYLSVMLQNFALINSQGCGHKTEDEERRVSTRA
SKGLRSETTPKTNLCEKCVPILQDILCLPGLPGQKHSTEASSKVDQHQDHNSTGKPLEKNADRSSYLFYL
SAKSFPSWDVEKDLPDILSLLKSQVCPKTKKYRKSTEGRKETSHESDKSEECQSLSSQKQTLAHHPKTSN
GKKLYECSKCGKTFRGKYSLDQHQRVHTGERPWECRDCGKFFSQTSHLNDHRRIHTGERPYECSECGKLF
RQNSSLVDHQKTHTGARPYECSQCGKSFSQKATLVKHKRVHTGERPYKCSECGNSFSQSAILNQHRRIHT
GVKPYECRECGKSFSQKATLIKHQRVHTGERPYKCSECGKSFSQSSILIQHRRIHTGARPYECSQCGKSF
SQKSGLIQHQVVHTGERPYECDTCGNSFSQCSSLIHHQKCHNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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