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Report for CCDS84221.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84221.1 Public Mus musculus 16 Nrros 23 108 98 CCDS HistoryNCBI Gene:224109Re-query CCDS DB by CCDS ID:84221.1Re-query CCDS DB by GeneID:224109See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84221.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115165.9 ENSMUSP00000110819.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115165.9Link to Ensembl Protein Viewer:ENSMUSP00000110819.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000115165Re-query CCDS DB by Protein ID:ENSMUSP00000110819
Original member Current member NCBI NM_001347182.1 NP_001334111.1 Accepted alive Link to Nucleotide Sequence:NM_001347182.1Link to Protein Sequence:NP_001334111.1Re-query CCDS DB by Nucleotide ID:NM_001347182Re-query CCDS DB by Protein ID:NP_001334111Link to BLAST:NP_001334111.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334111.1 669 Q8BMT4-2 669 100% 0 0

Chromosomal Locations for CCDS 84221.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 32143032 32145005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32165380 32165415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2010 nt):
ATGCGCCCCGCGGAGCCGCCTGGGCCTGCGGGAGCAGTCGACGGAGTCGCTGACTGCCGGGGTCTGAACC
TTGCTTCGGTACCCAGCAGCCTCCCACCCCATTCCCGGATGCTCATTCTGGATGCTAACCCTCTCAAGGA
CCTGTGGAACCATTCCCTCCAGGCCTACCCACGCCTGGAGAACCTCAGCCTGCATAGCTGTCACCTGGAC
CGTATCAGCCACTACGCCTTCCGAGAGCAAGGCCACTTACGCAACCTGGTTCTGGCAGACAACCGCCTCT
CGGAGAACTACAAGGAGTCAGCCGCAGCACTCCACACCCTGCTGGGACTTCGGAGACTGGACTTGTCTGG
AAACTCCCTGACCGAAGACATGGCGGCTCTCATGCTTCAGAACCTCTCCTCGTTGGAGGTTGTGTCCTTG
GCAAGGAATACCCTCATGAGGCTCGACGACTCTATCTTTGAGGGCCTGGAACACCTTGTAGAGCTAGATT
TGCAGAGAAACTACATCTTTGAGATCGAGGGCGGGGCGTTTGACGGCTTGACTGAGCTGAGGCGTCTCAA
CCTTGCCTATAACAACCTCCCCTGCATTGTGGACTTCAGCCTCACCCAGTTACGGTTCCTCAACGTCAGT
TATAACATCCTAGAGTGGTTCCTGGCAGCCAGGGAGGAGGTGGCCTTCGAATTGGAGATACTGGACCTGT
CTCACAACCAGCTGCTCTTCTTCCCACTCTTGCCTCAGTGCGGCAAGCTGCACACCCTCCTGCTCCAGGA
CAACAACATGGGCTTCTACAGGGAGCTTTACAACACCTCCTCCCCGCAGGAGATGGTGGCCCAGTTCCTT
CTTGTGGACGGCAATGTGACTAACATCACAACTGTCAACCTCTGGGAGGAGTTTTCCTCCAGCGACCTGT
CAGCTCTTCGCTTCCTGGACATGAGCCAAAACCAGTTCCGGCACTTGCCGGATGGTTTCCTGAAGAAGAC
ACCTTCCCTTTCCCACCTGAACCTCAACCAGAACTGCCTGAAGATGCTCCACATCCGGGAGCACGAGCCG
CCGGGAGCACTCACCGAGCTGGATCTGAGCCACAACCAGTTGGCAGAGCTGCACCTGGCTCCGGGGCTCA
CGGGCTCCCTCAGGAACCTCCGGGTGTTCAACCTGAGTTCCAACCAGCTCCTGGGGGTCCCCACTGGCCT
TTTCGACAATGCCAGCAGCATCACTACAATCGACATGAGTCACAATCAGATCTCACTTTGTCCTCAGATG
GTGCCCGTAGACTGGGAGGGGCCTCCCAGTTGTGTGGATTTCAGAAACATGGGCTCTTTGAGGAGCCTTT
CTCTGGACGGCTGTGGGCTGAAGGCATTACAAGACTGCCCGTTCCAGGGGACCTCCCTCACTCATTTAGA
CCTGTCTAGCAACTGGGGGGTTCTGAATGGGAGCATCAGCCCTCTCTGGGCTGTTGCCCCGACATTACAG
GTCCTGTCTCTCAGGGACGTGGGCCTTGGTTCTGGCGCTGCAGAGATGGACTTCTCTGCGTTTGGGAATC
TGCGGGCGTTGGATCTGTCGGGAAACTCCCTGACCAGCTTCCCAAAGTTCAAGGGCAGTTTGGCCCTTCG
GACTCTCGACCTCCGCAGAAACTCTCTCACGGCCCTCCCTCAGAGGGTTGTGTCCGAGCAGCCTCTGAGG
GGTCTGCAGACCATCTACCTCAGCCAGAACCCTTATGACTGCTGTGGGGTGGAAGGATGGGGGGCCCTGC
AGCAGCACTTCAAGACTGTTGCGGACTTGTCCATGGTCACTTGCAACCTCTCTTCCAAGATCGTCCGTGT
GGTGGAGCTGCCCGAAGGCCTGCCTCAGGGCTGTAAGTGGGAACAGGTGGACACTGGTCTCTTCTACCTC
GTGCTCATCCTGCCCAGCTGCCTCACCCTGCTGGTGGCCTGTACTGTCGTCTTCCTCACTTTTAAGAAGC
CTTTGCTTCAGGTCATCAAGAGCCGCTGCCACTGGTCCTCCATATACTGA

Translation (669 aa):
MRPAEPPGPAGAVDGVADCRGLNLASVPSSLPPHSRMLILDANPLKDLWNHSLQAYPRLENLSLHSCHLD
RISHYAFREQGHLRNLVLADNRLSENYKESAAALHTLLGLRRLDLSGNSLTEDMAALMLQNLSSLEVVSL
ARNTLMRLDDSIFEGLEHLVELDLQRNYIFEIEGGAFDGLTELRRLNLAYNNLPCIVDFSLTQLRFLNVS
YNILEWFLAAREEVAFELEILDLSHNQLLFFPLLPQCGKLHTLLLQDNNMGFYRELYNTSSPQEMVAQFL
LVDGNVTNITTVNLWEEFSSSDLSALRFLDMSQNQFRHLPDGFLKKTPSLSHLNLNQNCLKMLHIREHEP
PGALTELDLSHNQLAELHLAPGLTGSLRNLRVFNLSSNQLLGVPTGLFDNASSITTIDMSHNQISLCPQM
VPVDWEGPPSCVDFRNMGSLRSLSLDGCGLKALQDCPFQGTSLTHLDLSSNWGVLNGSISPLWAVAPTLQ
VLSLRDVGLGSGAAEMDFSAFGNLRALDLSGNSLTSFPKFKGSLALRTLDLRRNSLTALPQRVVSEQPLR
GLQTIYLSQNPYDCCGVEGWGALQQHFKTVADLSMVTCNLSSKIVRVVELPEGLPQGCKWEQVDTGLFYL
VLILPSCLTLLVACTVVFLTFKKPLLQVIKSRCHWSSIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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