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Report for CCDS83729.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83729.1 Public Mus musculus 10 Plk5 23 108 98 CCDS HistoryNCBI Gene:216166Re-query CCDS DB by CCDS ID:83729.1Re-query CCDS DB by GeneID:216166See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83729.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105351.1 ENSMUSP00000100988.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105351.1Link to Ensembl Protein Viewer:ENSMUSP00000100988.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105351Re-query CCDS DB by Protein ID:ENSMUSP00000100988
Original member Current member NCBI NM_001347124.1 NP_001334053.1 Accepted alive Link to Nucleotide Sequence:NM_001347124.1Link to Protein Sequence:NP_001334053.1Re-query CCDS DB by Nucleotide ID:NM_001347124Re-query CCDS DB by Protein ID:NP_001334053Link to BLAST:NP_001334053.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334053.1 595 Q4FZD7 595 100% 0 0

Chromosomal Locations for CCDS 83729.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80356563 80356667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80357984 80358091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80358242 80358358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80358787 80358916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80359242 80359329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80359410 80359505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80360155 80360353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80360440 80360566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80360686 80360762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80361122 80361194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80361404 80361481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80363009 80363165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80364016 80364145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80364223 80364333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80365090 80365281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1788 nt):
ATGGAGCCCCGGTCCCGGCGGCGGCGGAGCCGCCAGCTTGTGGCCACCTTCCTGCGCGACCCAGGCTCGG
GGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGAGCCTTCAGCCGCTGCTACAAGCTCACGGACAT
GTCCACCAGCGCTGTGTTCGCTCTTAAGGTGGTGCCAAGGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGG
AAGGTGGAGCGTGAGATCGCCCTGCACAGCCGCCTGCGCCACCGCAACATCGTGGCCTTCCACGCACACT
TTGCTGACCGCGATCACGTGTACATGGTGCTGGAGTATTGTAGCCGCCAGTCCTTGGCTCATGTGCTGAA
AGTGCGGCGGACTCTGACAGAGCCTGAAGTGCGCTATTACCTTCGGGGCCTGGTCAGCGGCCTGCGCTAC
TTGCACCAACAACGCATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAGG
TTAAGATAGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCTGCTGGTCGCTGCCACAGGGTGCTCTGCGG
GACTCCAAACTTCCAGGCACCTGAAGTGGTGTCCCGAAATGGACACTCGTGCAAATCTGACATCTGGGCT
CTGGGATGCATCATGTACACGGTGCTGACAGGCACGCCACCCTTTGCCGCGGCACCCTTGTCAGAGATGT
ACCAAAACATCCGTGACGGCCACTACCTCGAGCCTACTCACCTGTCGCCCAGCGCCCGCAGCCTCATTGC
ACGGCTCCTGGCACCGGACCCCGCCGAGCGGCCCAGCCTGGACCACTTACTGCAAGATGACTTCTTCAGT
CAGGGCTTCACCCCGGAGCGGCTGCCTCCACATTCCTGCCACAGCCCACCTGTGTTTGCCTTTCCCCCAC
CTCTGGGCAGGTTGTTCCGGAAGGTGGGCCAGCTCCTGCTGACCCAGTGCCGGCCACCTTGTCCCTTTAC
CTCAAAAGAGGCCTCAGGCCCTGGAGAAGAGGGCACAGAACCAGACCACATGGAAGCCGGCAACGAGGAA
AGGGATCCTCTCTGCACCGAGGGCCGAATCCACCTCCTCACCCTTGGGACCCCGCGGACTGGCCTGGCGG
GCCCAAAAGGGAGCTTGGCTCTGCAGCTGGAAGTGGCAACCAGAAAACTGTTCCTCTGCTTGGACGCAGG
ACCTATGGCTGGACAGGACCCCCCAGGGGAGCAGCGGCCTGTTCTCTGGGCTCCTAAGTGGGTGGATTAC
TCCCTCAAGTATGGCTTCGGCTACCAGCTGTCGGATGGGGGCAGTGGGGTGCTGTTTCGGGATGGCTCCC
ACATGGCCCTGCGCCCCCAAGGCGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTCTGGACCTTCAC
CCTGAGGGACGTCCCCAGCCCACTTCGTGCCAAGCTGGCTGTCCTGCGGCTCTTTGCCTGCTATATGCAG
CGGCGTCTGCGGGAGGAGGGGACTGTGCCCATGCCTGCCACACCTGCCTCTCCTGACATCTCTCTGCTGA
GCTTCATTGCTGACTCCCAGGCTATGGTCATGCTGTTTAGCAATGGGACAGTGCAGGTCAGCCTCAAAAC
CTCCCAAACCCAGCTGGTGCTAAGTGGGGAGGACGAGGACCTCCTGCTCACCCTCCAGGAGCCAGGGGGA
CCCGCTGTGGGCGTCTCCTACACACTCGATGTCCTGCGGAGCCATGGCTTCACCCTTGCAGTCCACCATC
ACCTGCGCCATGGCCTGCATCTGCTACAGAGTGTCTGA

Translation (595 aa):
MEPRSRRRRSRQLVATFLRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAGRLRLRG
KVEREIALHSRLRHRNIVAFHAHFADRDHVYMVLEYCSRQSLAHVLKVRRTLTEPEVRYYLRGLVSGLRY
LHQQRIVHRDLKPSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQAPEVVSRNGHSCKSDIWA
LGCIMYTVLTGTPPFAAAPLSEMYQNIRDGHYLEPTHLSPSARSLIARLLAPDPAERPSLDHLLQDDFFS
QGFTPERLPPHSCHSPPVFAFPPPLGRLFRKVGQLLLTQCRPPCPFTSKEASGPGEEGTEPDHMEAGNEE
RDPLCTEGRIHLLTLGTPRTGLAGPKGSLALQLEVATRKLFLCLDAGPMAGQDPPGEQRPVLWAPKWVDY
SLKYGFGYQLSDGGSGVLFRDGSHMALRPQGGHVSYQPDQGTLWTFTLRDVPSPLRAKLAVLRLFACYMQ
RRLREEGTVPMPATPASPDISLLSFIADSQAMVMLFSNGTVQVSLKTSQTQLVLSGEDEDLLLTLQEPGG
PAVGVSYTLDVLRSHGFTLAVHHHLRHGLHLLQSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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