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Report for CCDS24470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24470.1 Public Mus musculus 11 Tmem17 23 108 98 CCDS HistoryNCBI Gene:103765Re-query CCDS DB by CCDS ID:24470.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24470.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059319.7 ENSMUSP00000051414.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059319.7Link to Ensembl Protein Viewer:ENSMUSP00000051414.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000059319Re-query CCDS DB by Protein ID:ENSMUSP00000051414
Original member Current member NCBI NM_153596.3 NP_705824.1 Accepted alive Link to Nucleotide Sequence:NM_153596.3Link to Protein Sequence:NP_705824.1Re-query CCDS DB by Nucleotide ID:NM_153596Re-query CCDS DB by Protein ID:NP_705824Link to BLAST:NP_705824.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705824.1 198 Q8K0U3 198 100% 0 0

Chromosomal Locations for CCDS 24470.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 22512484 22512583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 22517188 22517291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 22517408 22517521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 22518381 22518659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGGAGCTGCCGGACCCTGTTCGCCAGCGCCTGAGCAACCTCAGCCTCACCGTGTTCGGCGACTCCAGCC
GCACCGGGCCAGAGTCCAGTGATGCGGCCGATAATGAAATGGTCTCCAGCCTGGCCTTGCAGATGTCCCT
TTATTTTAACTCTTACTTTTTCCCACTGTGGTGGGTGAGCTGCATTGTGATGCTGCACCTGAAGTATTCC
ATCTTGCCTGACTACTACAAATTCATTGTGGTTACTGTCGTCATCCTCATAACCTTGATTGAAGCGATCC
GGTTATACCTGGGCTGCATGGGTAACCTTCAGGAGAAGGTTCCTGAGCTAGCTGGCTTTTGGCTTCTGAG
CCTTCTACTGCAGTTGCCTTTAATCCTTTTCTTGCTCCTTAATGATGGCCTAAGGAATCTGCCCCTGGAG
AAAGCAATACATATCATCTTCACCATCTTTCTTACTTTCCAAGTCATCTCAGCATTTCTGACCCTAAAGA
AAATGGTCAACCAGCTGGCAGCCCGTTTCCACCTCCAGGACTTTGATCAGCTGTCTTCAAGCAGTGCAGC
TGTAAGGAGGGTAAGACAATGCACGGAAGAGCTCTGA

Translation (198 aa):
MELPDPVRQRLSNLSLTVFGDSSRTGPESSDAADNEMVSSLALQMSLYFNSYFFPLWWVSCIVMLHLKYS
ILPDYYKFIVVTVVILITLIEAIRLYLGCMGNLQEKVPELAGFWLLSLLLQLPLILFLLLNDGLRNLPLE
KAIHIIFTIFLTFQVISAFLTLKKMVNQLAARFHLQDFDQLSSSSAAVRRVRQCTEEL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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