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Report for CCDS31604.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31604.1 Public Homo sapiens 11 NAALADL1 24 110 108 CCDS HistoryNCBI Gene:10004Re-query CCDS DB by CCDS ID:31604.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31604.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358658.8 ENSP00000351484.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358658.8Link to Ensembl Protein Viewer:ENSP00000351484.3Re-query CCDS DB by Nucleotide ID:ENST00000358658Re-query CCDS DB by Protein ID:ENSP00000351484
Original member Current member NCBI NM_005468.3 NP_005459.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005468.3Link to Protein Sequence:NP_005459.2Re-query CCDS DB by Nucleotide ID:NM_005468Re-query CCDS DB by Protein ID:NP_005459Link to BLAST:NP_005459.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005459.2 740 Q9UQQ1-1 740 100% 0 0

Chromosomal Locations for CCDS 31604.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65045271 65045457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65045822 65045914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65046027 65046114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65046189 65046362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65046445 65046526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65047475 65047565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65047647 65047738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65047981 65048048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65048152 65048215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65048300 65048385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65053218 65053337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65053491 65053576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65054250 65054354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65054455 65054738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65057371 65057493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65057875 65057996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65058078 65058250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65058337 65058521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2223 nt):
ATGCAGTGGACGAAGGTGTTGGGGCTGGGGCTGGGGGCTGCTGCCCTCTTGGGGCTGGGGATCATCCTCG
GC
CACTTTGCCATCCCCAAAAAAGCCAACTCACTGGCCCCCCAGGACCTGGACCTGGAGATCCTGGAGAC
C
GTCATGGGGCAGCTGGATGCCCACAGGATCCGGGAGAACCTCAGAGAACTCTCCAGGGAGCCACACCTG
GCC
TCCAGCCCTCGGGATGAGGACCTGGTGCAGCTGCTGCTGCAGCGCTGGAAGGACCCAGAGTCAGGCC
TG
GACTCGGCCGAGGCCTCCACGTACGAAGTGCTGCTGTCCTTCCCTAGCCAGGAGCAGCCCAACGTCGT
G
GACATCGTGGGCCCCACTGGGGGCATCATCCACTCCTGCCACCGGACTGAGGAGAACGTGACCGGGGAG
CAA
GGGGGGCCAGATGTGGTACAACCCTATGCTGCCTATGCTCCTTCTGGAACCCCACAGGGCCTCCTCG
TC
TATGCCAACCGGGGCGCGGAAGAAGACTTTAAGGAGCTACAGACTCAGGGCATCAAACTTGAAGGCAC
C
ATTGCCCTGACTCGATATGGGGGTGTAGGGCGTGGGGCCAAGGCTGTGAACGCTGCCAAGCACGGGGTA
GCT
GGGGTGCTGGTGTACACAGACCCTGCCGACATCAACGATGGGCTGAGCTCACCCGACGAAACCTTTC
CC
AACTCCTGGTACCTGCCCCCCTCAGGAGTGGAGCGAGGCTCCTACTACGAGTATTTTGGGGACCCTCT
G
ACTCCCTACCTTCCAGCCGTCCCCTCTTCCTTCCGCGTGGACCTTGCCAATGTCTCCGGATTTCCCCCA
ATT
CCTACACAGCCCATTGGCTTCCAGGATGCAAGAGACCTGCTCTGTAACCTCAACGGAACTTTGGCCC
CA
GCCACCTGGCAGGGAGCACTGGGCTGCCACTACAGGTTGGGTCCCGGCTTCCGGCCTGACGGAGACTT
C
CCAGCAGACAGCCAGGTGAATGTGAGCGTCTACAACCGCCTGGAGCTGAGGAACTCTTCCAACGTCCTG
GGC
ATCATCCGTGGGGCTGTGGAGCCTGATCGCTACGTGCTGTATGGGAACCACCGAGACAGCTGGGTGC
AC
GGGGCTGTGGACCCCAGCAGTGGCACCGCCGTCCTCCTGGAGCTCTCCCGTGTCCTGGGGACCCTGCT
G
AAGAAGGGCACCTGGCGTCCTCGCAGATCAATCGTGTTTGCGAGCTGGGGGGCTGAGGAGTTTGGGCTC
ATT
GGCTCCACGGAATTCACAGAAGAGTTCTTCAACAAGCTGCAGGAGCGCACGGTGGCCTACATCAACG
TG
GACATCTCGGTGTTTGCCAACGCTACCCTTAGGGTGCAGGGGACGCCCCCTGTCCAGAGCGTCGTCTT
C
TCTGCAACCAAAGAGATCCGCTCACCAGGCCCTGGCGACCTGAGCATCTACGACAACTGGATCCGGTAC
TTC
AACCGCAGCAGCCCGGTGTACGGCCTGGTCCCCAGCTTGGGTTCTCTGGGTGCTGGCAGCGACTATG
CA
CCCTTCGTTCACTTCCTGGGCATCTCCTCCATGGACATTGCCTATACCTATGACCGGAGCAAGACTTC
A
GCCAGGATCTACCCCACCTACCACACAGCCTTTGACACCTTTGACTATGTGGACAAGTTTTTGGACCCG
G
GC
TTCAGCAGCCATCAGGCTGTGGCCCGGACAGCGGGGAGTGTGATTCTCCGGCTCAGTGACAGCTTCT
TC
CTGCCCCTCAAAGTCAGTGACTACAGTGAGACACTCCGCAGCTTCCTGCAGGCAGCCCAGCAAGATCT
T
GGGGCCCTGCTGGAGCAGCACAGCATCAGCCTGGGGCCTCTGGTGACTGCAGTGGAGAAGTTTGAGGCA
GAA
GCTGCAGCCTTGGGCCAACGCATATCAACACTGCAGAAGGGCAGCCCTGACCCCCTGCAGGTCCGGA
TG
CTCAATGACCAGTTGATGCTCTTGGAACGGACCTTTCTGAACCCTAGAGCCTTCCCAGAGGAACGCTA
C
TACAGCCATGTGCTCTGGGCACCTCGCACGGGCTCCGTAGTCACATTCCCGGGCCTATCCAATGCCTGC
TCC
AGGGCCAGGGACACAGCTTCTGGATCTGAAGCTTGGGCTGAGGTCCAGAGACAGCTCAGCATTGTGG
TG
ACAGCCCTGGAGGGTGCGGCAGCCACCCTGAGGCCTGTGGCTGACCTCTGA


Translation (740 aa):
MQWTKVLGLGLGAAALLGLGIILGHFAIPKKANSLAPQDLDLEILETVMGQLDAHRIRENLRELSREPHL
A
SSPRDEDLVQLLLQRWKDPESGLDSAEASTYEVLLSFPSQEQPNVVDI
VGPTGGIIHSCHRTEENVTGE
Q
GGPDVVQPYAAYAPSGTPQ
GLLVYANRGAEEDFKELQTQGIKLEGTIALTRYGGVGRGAKAVNAAKHGV
A
GVLVYTDPADINDGLSSPDETFPNSWYLPPSGVERGSYYEYFGDPLTPYLPAVPSSFRVDLANVSGFPP
I
PTQPIGFQDARDLL
CNLNGTLAPATWQGALGCHYRLGPGFRPDGDFPADSQVNVSVYNRLELRNSSNVL
G
IIRGAVEP
DRYVLYGNHRDSWVHGAVDPSSGTAVLLELSRVLGTLLKKGTWRPRRSIVFASWGAEEFGL
I
GSTEFTE
EFFNKLQERTVAYINVDISVFANATLRVQGTPPVQSVVFSATKEIRSPGPGDLSIYDNWIRY
F
NRSSPVYGLVP
SLGSLGAGSDYAPFVHFLGISSMDIAYTYDRSKTSARIYPTYHTAFDTFDYVDKFLDP
G
FSSHQAVARTAGSVILRLSDSFFLPLKVSDYSETLRSFLQAAQQDLGALLEQHSISLGPLVTAVEKFEA
E
AAALGQRISTLQKGSP
DPLQVRMLNDQLMLLERTFLNPRAFPEERYYSHVLWAPRTGSVVTFPGLSNAC
S
RARDTASGSEAWAEVQRQLSIVVTALEGAAATLRPVADL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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