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Report for CCDS52267.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
52267.1 |
Public |
Mus musculus |
7 |
Pcsk6 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 52267.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000055576.11 |
ENSMUSP00000053742.5 |
Accepted |
alive |
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NCBI |
NM_011048.1 |
NP_035178.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 52267.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2880 nt): ATGCCTCCGCGCGCGCCGCCAGCGCCCGGGCCCCGGCCGCCGCCCCGGGCCGCCGATGTCGCGCGGGGCG CAGGGGCCGCCGGCCGGCACGGACTCCCGCCGCTCGCGCTGCGCCCCTGGCGTTGGCTGCTTCTGCTCGC GCTGCCCGCCGCCTGCTCCGCGCTGCCGCCGCCGCGCCCCGTCTACACCAACCACTGGGCAGTGCAAGTG CTGGGCGGCCCCGGCGCGGCGGACCGCGTGGCTGCGGCGCACGGCTACCTCAACTTGGGCCAGATTGGAA ACCTGGACGATTACTATCATTTTTACCACAGCAAGACCTTCAAGAGATCGACCTTGAGCAGCAGGGGCCC CCACACCTTCCTCAGAATGGACCCACAGGTAAAATGGCTGCAACAACAGGAAGTGAAGCGCAGAGTCAAG AGACAGGCGCGAAGTGACTCTCTTTATTTCAATGATCCCATTTGGTCTAACATGTGGTACATGCATTGTA CTGATAAGAACAGTCGCTGTCGGTCAGAGATGAACGTCCAGGCGGCGTGGAAGCGTGGCTACACAGGAAA GAATGTGGTCGTCACCATCCTCGATGACGGCATAGAAAGGAATCACCCAGACCTGGCCCCCAACTACGAT TCCTATGCAAGCTACGATGTCAATGGAAATGATTATGACCCATCCCCGAGATATGACGCCAGCAACGAGA ACAAACATGGCACTCGCTGTGCGGGTGAAGTCGCTGCCTCGGCCAACAACTCCTACTGCATCGTGGGCAT CGCATATAATGCAAAGATAGGAGGCATCCGGATGCTGGACGGCGATGTGACCGATGTGGTGGAGGCCAAG TCTCTGGGCATCAGACCCAACTACATTGACATTTACAGCGCCAGTTGGGGACCCGATGATGACGGAAAGA CAGTAGATGGACCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGCATTAAAAAGGGTCGCCAAGGTCT GGGCTCCATTTTTGTTTGGGCCTCTGGGAATGGTGGGAGAGAAGGGGACCACTGCTCCTGTGATGGCTAC ACCAACAGCATCTACACCATCTCCGTAAGCAGCACCACTGAGAACGGCCACAAACCCTGGTACCTGGAAG AATGCGCTTCCACGTTGGCTACCACCTACAGCAGCGGGGCCTTCTATGAACGGAAGATCGTCACCACAGA TCTGCGTCAGCGCTGCACCGACGGCCACACTGGGACATCAGTCTCAGCCCCCATGGTGGCTGGTATCATT GCCTTGGCTCTAGAAGCAAACAACCAGTTGACCTGGAGGGATGTGCAGCACCTGCTGGTGAAGACATCAC GGCCAGCTCATCTGAAGGCGAGCGACTGGAAAGTCAACGGAGCTGGGCATAAAGTTAGCCATCTCTATGG ATTTGGCTTGGTGGATGCAGAAGCTCTGGTCCTGGAGGCGAGGAAGTGGACGGCAGTGCCCTCCCAGCAC GTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCC TGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGGTGTACCTGGAGCATGTGGTTGTCCGAATCTC TATCTCACACCCACGCCGGGGCGATCTCCAGATCCACCTGATTTCTCCCTCTGGAACCAAGTCTCAACTT TTGGCAAAGAGATTGCTGGATTTTTCCAATGAGGGGTTCACAAACTGGGAATTCATGACCGTCCACTGCT GGGGAGAAAAGGCTGAAGGGGAGTGGACTCTGGAAGTGCAGGATATACCATCGCAGGTCCGAAACCCAGA GAAACAAGGAAAGCTGAAAGAATGGAGCCTCATTTTATATGGCACCGCAGAGCACCCATATCGCACCTTC AGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTG GACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGCTCCTTCCATCCAAGGCTCTCC TAATACTTTACAGACCAGTGTGTGCCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCCCAATGCAGAC CAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAACTCCAAGACAAACAGGAAGTGTGTGAGCGAGTGCC CCTTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGCCGTCGCTGCCATAAGGGATGTGAGACGTGCAC GGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGTTCTATCACCACCAGGAGACGAACACGTGT GTGACCCTCTGTCCTGCCGGACTTTATGCTGATGAAAGTCAGAGACTCTGCCTCAGGTGCCACCCGAGCT GTCAGAAGTGCGTGGATGAACCTGAGAAGTGCACTGTGTGTAAGGAGGGATTCAGCCTGGCACGGGGCAG CTGCATTCCGGACTGTGAACCGGGTACCTACTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCATCAC ACCTGCCGGACCTGTGTGGGGCCCAGCAGAGAAGAGTGTATTCACTGTGCAAAAAGCTTCCACTTCCAAG ACTGGAAATGTGTGCCGGCCTGCGGTGAGGGCTTCTACCCGGAGGAGATGCCTGGCTTACCCCACAAAGT GTGTCGAAGATGTGAGGAGAACTGCCTGAGCTGCGAGGGCTCCAGTAGGAACTGCAGCAGATGTAAAGCC GGCTTCACACAGCTGGGAACCTCCTGCATCACCAACCACACGTGCAGCAATGCCGATGAGACCTTCTGCG AGATGGTGAAGTCCAATCGGCTCTGCGAACGGAAGCTCTTCATCCAGTTTTGCTGCCGCACCTGCCTCCT GGCTGGGTAG
Translation (959 aa): MPPRAPPAPGPRPPPRAADVARGAGAAGRHGLPPLALRPWRWLLLLALPAACSALPPPRPVYTNHWAVQV LGGPGAADRVAAAHGYLNLGQIGNLDDYYHFYHSKTFKRSTLSSRGPHTFLRMDPQVKWLQQQEVKRRVK RQARSDSLYFNDPIWSNMWYMHCTDKNSRCRSEMNVQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYD SYASYDVNGNDYDPSPRYDASNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLDGDVTDVVEAK SLGIRPNYIDIYSASWGPDDDGKTVDGPGRLAKQAFEYGIKKGRQGLGSIFVWASGNGGREGDHCSCDGY TNSIYTISVSSTTENGHKPWYLEECASTLATTYSSGAFYERKIVTTDLRQRCTDGHTGTSVSAPMVAGII ALALEANNQLTWRDVQHLLVKTSRPAHLKASDWKVNGAGHKVSHLYGFGLVDAEALVLEARKWTAVPSQH VCVATADKRPRSIPIVQVLRTTALTNACADHSDQRVVYLEHVVVRISISHPRRGDLQIHLISPSGTKSQL LAKRLLDFSNEGFTNWEFMTVHCWGEKAEGEWTLEVQDIPSQVRNPEKQGKLKEWSLILYGTAEHPYRTF SSHQSRSRMLELSVPEQEPPKAAGQPPQAETPEDEEEYTAPSIQGSPNTLQTSVCHPECGDKGCDGPNAD QCLNCVHFSLGNSKTNRKCVSECPLGYFGDAAARRCRRCHKGCETCTGRSPAQCLSCRRGFYHHQETNTC VTLCPAGLYADESQRLCLRCHPSCQKCVDEPEKCTVCKEGFSLARGSCIPDCEPGTYFDSELVKCGECHH TCRTCVGPSREECIHCAKSFHFQDWKCVPACGEGFYPEEMPGLPHKVCRRCEENCLSCEGSSRNCSRCKA GFTQLGTSCITNHTCSNADETFCEMVKSNRLCERKLFIQFCCRTCLLAG
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