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Report for CCDS83387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83387.1 Public Homo sapiens 9 TRMO 24 110 108 CCDS HistoryNCBI Gene:51531Re-query CCDS DB by CCDS ID:83387.1Re-query CCDS DB by GeneID:51531See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83387.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375118.1 ENSP00000364259.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375118.1Link to Ensembl Protein Viewer:ENSP00000364259.1Re-query CCDS DB by Nucleotide ID:ENST00000375118Re-query CCDS DB by Protein ID:ENSP00000364259
Original member Current member NCBI NM_001330725.2 NP_001317654.1 Accepted alive Link to Nucleotide Sequence:NM_001330725.2Link to Protein Sequence:NP_001317654.1Re-query CCDS DB by Nucleotide ID:NM_001330725Re-query CCDS DB by Protein ID:NP_001317654Link to BLAST:NP_001317654.1
Original member Current member NCBI NM_001371660.1 NP_001358589.1 Accepted alive Link to Nucleotide Sequence:NM_001371660.1Link to Protein Sequence:NP_001358589.1Re-query CCDS DB by Nucleotide ID:NM_001371660Re-query CCDS DB by Protein ID:NP_001358589Link to BLAST:NP_001358589.1
Original member Current member NCBI NM_001371661.1 NP_001358590.1 Accepted alive Link to Nucleotide Sequence:NM_001371661.1Link to Protein Sequence:NP_001358590.1Re-query CCDS DB by Nucleotide ID:NM_001371661Re-query CCDS DB by Protein ID:NP_001358590Link to BLAST:NP_001358590.1

Chromosomal Locations for CCDS 83387.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 97904733 97904992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 97909960 97910587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGATACATGGCACACCCGTACTAGACATCAAGCCCTACATAGCTGAGTATGACTCACCGCAAAATGTGA
TGGAGCCTTTAGCAGACTTTAATTTACAGAATAACCAACATACACCAAACACTGTGTCCCAGTCTGACAG
CAAGACTGACAGCTGTGACCAGCGACAGCTCTCAGGGTGTGATGAGCCACAACCCCACCATAGCACTAAG
AGGAAACCTAAATGTCCTGAAGACAGAACTTCAGAAGAAAACTACCTGACACACAGTGACACAGCCAGAA
TTCAGCAAGCATTTCCTATGCACAGGGAGATAGCAGTGGATTTTGGTTTGGAATCAAGACGTGATCAGAG
TTCCAGCGTGGCAGAAGAACAAATTGGCCCATATTGCCCAGAGAAGAGCTTTTCAGAGAAAGGTACAGAC
AAGAAGCTAGAAAGAGTGGAAGGAGCAGCAGTCTTGCAAGGAAGCAGGGCAGAGACACAGCCCATGGCCC
CTCACTGCCCTGCTGGAAGGGCTGATGGAGCTCCCCGCAGCGTGGTTCCTGCCTGGGTGACAGAGGCTCC
TGTGGCCACTTTAGAAGTGCGGTTTACTCCTCATGCCGAGATGGACCTTGGGCAGCTCAGTTCACAAGAT
GTTGGTCAGGCGTCATTTAAATATTTTCAGTCAGCAGAGGAAGCAAAGCGTGCCATTGAGGCTGTGCTGT
CAGCGGATCCTCGGTCTGTGTACCGCCGGAAGCTTTGCCAGGACCGCCTTTTCTACTTTACTGTAGACAT
AGCGCATGTCACTTGCTGGTTTGGTGATGGCTTTGCAGAGGTGCTGAGGATCAAGCCGGCTTCTGAGCCT
GTTCATATGACTGGCCCTGTGGGGTCCTTGGTGTCTCTAGGGTCTTAA

Translation (295 aa):
MIHGTPVLDIKPYIAEYDSPQNVMEPLADFNLQNNQHTPNTVSQSDSKTDSCDQRQLSGCDEPQPHHSTK
RKPKCPEDRTSEENYLTHSDTARIQQAFPMHREIAVDFGLESRRDQSSSVAEEQIGPYCPEKSFSEKGTD
KKLERVEGAAVLQGSRAETQPMAPHCPAGRADGAPRSVVPAWVTEAPVATLEVRFTPHAEMDLGQLSSQD
VGQASFKYFQSAEEAKRAIEAVLSADPRSVYRRKLCQDRLFYFTVDIAHVTCWFGDGFAEVLRIKPASEP
VHMTGPVGSLVSLGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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