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Report for CCDS23201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23201.1 Public Mus musculus 9 Ube2q2 23 108 98 CCDS HistoryNCBI Gene:109161Re-query CCDS DB by CCDS ID:23201.1Re-query CCDS DB by GeneID:109161See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23201.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059555.14 ENSMUSP00000059798.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059555.14Link to Ensembl Protein Viewer:ENSMUSP00000059798.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000059555Re-query CCDS DB by Protein ID:ENSMUSP00000059798
Original member Current member NCBI NM_180600.3 NP_850931.2 Accepted alive Link to Nucleotide Sequence:NM_180600.3Link to Protein Sequence:NP_850931.2Re-query CCDS DB by Nucleotide ID:NM_180600Re-query CCDS DB by Protein ID:NP_850931Link to BLAST:NP_850931.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_850931.2 378 Q8K2Z8-1 378 100% 0 0

Chromosomal Locations for CCDS 23201.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 55149635 55149826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55162968 55163069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55168203 55168307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55176191 55176247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55180473 55180613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55183102 55183186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55184904 55184964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55185670 55185760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55191842 55191900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55194987 55195035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55195424 55195519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55203701 55203767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55205960 55205991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGTCCGTGTCAGGGCTCAAGGCCGAGCTGAAGTTCCTGGCGTCCATCTTCGACAAGAACCACGAGCGAT
TCCGCATCGTCAGCTGGAAGCTGGACGAGCTGCACTGCCAGTTCCTGGTGCCGCCGCCGCCACCACCGCC
GGGCAGCTCGCTTTCGCCGCCGCCGCCGCTCACACTTCACTGCAACATCACGGAATCTTACCCATCTTCT
TCACCAATATGGTTTGTGGACTCTGATGACCCAAATCTGACATCAGTTCTGGAACGCTTAGAAGATACTA
AGAACAACAGTTCGCTCCGTCAGCAATTGAAGTGGTTGATATGTGACCTCTGCAGATTATATAACCTTCC
TAAGCACCTGGATGTTGAGATGCTAGATCAACCACTACCCACGGGTCAGAATGGGACAACTGAAGAAGTA
ACTTCAGAAGAAGAGGAAGAGGAGGAGATGGCTGAAGATATAGAAGACTTGGATCACTATGAGATGAAGG
AAGAAGAACCTATTAATGGGAAAAAGTCAGAGGATGAAGGGATTGAAAAAGAAAATTTGGCAATATTAGA
GAAAATCAGGAAGACTCAAAGGCAAGACCATTTAAATGGTGCAGTGTCTGGGTCAGTACAAGCATCAGAC
AGACTGATGAAGGAGCTCAGGGACGTCTACAGATCACAGAGCTACAAGGCAGGGATTTATTCAGTGGAGC
TAATAAATGACAGCTTATATGACTGGCATGTCAAACTACACAAGGTTGACTCTGATAGTCCTTTGCACAG
TGATCTTCAGATCTTAAAAGAAAAAGAAGGCATAGAATATATTTTGCTTAACTTCTCTTTTAAGGATAAT
TTTCCATTTGATCCTCCGTTTGTTAGAGTGGTGTTACCTGTTCTCTCAGGAGGGTATGTGTTGGGTGGAG
GAGCACTTTGTATGGAACTTCTCACAAAACAGGGCTGGAGCAGTGCCTACTCAATAGAATCTGTCATCAT
GCAGATCAATGCCACCTTAGTGAAAGGCAAAGCCCGGGTGCAGTTTGGAGCAAATAAGAATCAGTATAAT
CTAGCACGAGCCCAACAGTCCTATAATTCCATTGTACAGATACATGAGAAAAATGGCTGGTACACACCTC
CAAAGGAAGATGGCTAA

Translation (378 aa):
MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPPPPPPPGSSLSPPPPLTLHCNITESYPSS
SPIWFVDSDDPNLTSVLERLEDTKNNSSLRQQLKWLICDLCRLYNLPKHLDVEMLDQPLPTGQNGTTEEV
TSEEEEEEEMAEDIEDLDHYEMKEEEPINGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASD
RLMKELRDVYRSQSYKAGIYSVELINDSLYDWHVKLHKVDSDSPLHSDLQILKEKEGIEYILLNFSFKDN
FPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYN
LARAQQSYNSIVQIHEKNGWYTPPKEDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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