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Report for CCDS26988.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26988.1 Public Mus musculus 14 Fbxo34 23 108 98 CCDS HistoryNCBI Gene:78938Re-query CCDS DB by CCDS ID:26988.1Re-query CCDS DB by GeneID:78938See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26988.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043112.8 ENSMUSP00000044675.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043112.8Link to Ensembl Protein Viewer:ENSMUSP00000044675.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000043112Re-query CCDS DB by Protein ID:ENSMUSP00000044675
Original member Current member NCBI NM_030236.3 NP_084512.2 Accepted alive Link to Nucleotide Sequence:NM_030236.3Link to Protein Sequence:NP_084512.2Re-query CCDS DB by Nucleotide ID:NM_030236Re-query CCDS DB by Protein ID:NP_084512Link to BLAST:NP_084512.2

Chromosomal Locations for CCDS 26988.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 47472575 47472717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47529175 47531272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2241 nt):
ATGGGTTTCGGGGCGAGCGTTGGGCTCCGCCGCTCAGCGCTGAGCTCCTGGTCCGCCTCAGTGTCGGGGA
GCGAGTCAGGCCTGCCGCCGCCGCATCGGGCTGCCGCAGCCCCGGGCCAGGCCCTGGCCCGGCAGAAGCA
CAGGGCATCTGTTATGCACCTTAAGCTGTACTGGAAACTCCAGAAGAAAGAGCGCCCTCTTGAGGTCAGC
AGGGACACCCTGAGAACGCCTATGAGCCACGGAAAGGCCAACGGTGATGTGAAGGCCAGAGCCAGCTACA
TGAAACCCACCGTCCTTCCTTCAGCCTCCCTTGTCAAAGCATCGTCTAGAAAACCTTTTGGGATCCTTTC
TCCAAATGTTCTGTGCAGTATGAGTGGGAAGAGCCCTGTGGAGAACAGCTTGAATGTTAAAGCCAAAAAG
AACGTGCTGTCTGCAGCCGTGCACCAGAGTGAGGAGGGGCTGCCTGGGACCTGGGCTATTGTCAAACCTG
GGAACACGAAGGAGAAAATTGCATTCTTTGCAGCCCACCAGTATAGCAATAGGATAGGCTCTATGAAAAT
TAAAAGTTCCTGGGATATCGATGGGAGAGCCACTAAAAGAAGGAAAAAATCAGGAGATCTTAAGAAAGCC
AAGTTACAGCTAGAAATGATGAGAGAGATCAACAGCCAGTGCTACCAGTCTGAGCCGTTTGTGTGTGGCG
TGGAGCACTGTTCTGTGCACTACATGAGTGACAGCGGGGACGGTGTCTGTGCTGCGAGGCCTCTGTCGGT
GATACAGATGGTTGCCTTCCTTGAGCAGAAGGCCACTGCTCTGCTAGCTAGCTGCACAAAAAACTGCACA
AATTCGCCTGCCATTGTGAAGATTTCTGGCCAGTCCCGAGGTATACCGCCTGCACCTGAGCCCTTCTCTG
CTCCGGAAACTTGTGAAGAACCCAAGGAACAAGAAAATCCCGAGACTGGCAGATCCCAGGGTGAGCCAGT
CCGTGTCCTTGACATGGTAGCCAGGTTGGAGTCTGAGTGCCTGAAGCACCAGGGCCAGCGGGAACCCGGG
AGCTTGTCACGCAATAACAGTTTCCGTCGAAATGTAGGCAGGGTGTTGCTCACTAATGGTTCTCAGGCCA
GCGACAAAAGTGAAGAGGGCTCTGCAGACACAGCCGACCCTCAGGAGAATCCCTTGCAGCCGGTATCTGT
GGGTGAAGAACCCTCCGTAACTGAGCATCATTCTGTAGGGGAGCAGGCCTGGGATGGCACTTCTCAAAGC
TGTCCCTCATTGCCAGCCACTGTGAGCTTCCACATGGACAGCACAGATCTAGAGCCGGGTCAGCAAACAG
CTATGAAGAGCTGCAGCCGGGATGACGTAGAAATGGTGGAGGAATTTGATGAATTGCCTACAGATGCTGT
CCGTCGCATAAGAAGAGAGCTTGTAACAGTCACAAAGCACAGTCCTGAGCAGAGGCAGGACCCGCTGTGC
ATCAGCATCACTGTGTGCACGGTAGAGAAAGACCGGCCGGCGGCTTTAGACTCCCTTGAGGAGCCTCTTC
CCGGGATGCTCTTCTTTCTGTCATCTGGACAGGACCAGCAAGCGCACCCCCAGCTGAGGGAACACCCAGC
ACCAGAGGCCTCAGAGGCCAGTCAGCCTCAAGATGCTGCTGAGGGCAGCAGTGCAGGTGAGGAGAAAGAT
GCCTCTGTGGAGCCGCTCCTCCCAGCAGCCTCTCCGGGAGGGAGCACCTCGCAGGTGCTTGAGGCAGCCA
CGTGCAAGAAGCAGGTGTCACAGGACTTTCTGGAGACCAGGTTTAAGATCCAGCAGCTTCTGGAGCCTCA
GCAGTACATGGCATGCCTGCCCCACCACATCATAGTGAAAATCTTCAGGTTACTCCCTACCCTGAGTTTA
GCCATTCTTAAATGTACCTGTCGCTACTTCAAGTCCATCATTGAATACTACAACATCAGGCCAGCAGATT
CTCGGTGGGTTCGAGACCCACGCTATAGGGAAGACCCTTGCAAGCAGTGCAAGAAAAAGTATGTGAAAGG
GGATGTGTCCCTGTGCCGGTGGCACCCCAAACCCTATTGCCAGGCTTTGCCATATGGGCCTGGCTACTGG
ATGTGCTGCCACCAGTCTCAGAAGGGCTTTCCTGGCTGTAAGTTAGGCCTTCATGACAATCACTGGTTAC
CTGCCTGCCATAGCTTTAACCGGGCAATCCATAAGAAGACGAGAGGGAGTGAGACGGAAGAGGAGTACTG
A

Translation (746 aa):
MGFGASVGLRRSALSSWSASVSGSESGLPPPHRAAAAPGQALARQKHRASVMHLKLYWKLQKKERPLEVS
RDTLRTPMSHGKANGDVKARASYMKPTVLPSASLVKASSRKPFGILSPNVLCSMSGKSPVENSLNVKAKK
NVLSAAVHQSEEGLPGTWAIVKPGNTKEKIAFFAAHQYSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKA
KLQLEMMREINSQCYQSEPFVCGVEHCSVHYMSDSGDGVCAARPLSVIQMVAFLEQKATALLASCTKNCT
NSPAIVKISGQSRGIPPAPEPFSAPETCEEPKEQENPETGRSQGEPVRVLDMVARLESECLKHQGQREPG
SLSRNNSFRRNVGRVLLTNGSQASDKSEEGSADTADPQENPLQPVSVGEEPSVTEHHSVGEQAWDGTSQS
CPSLPATVSFHMDSTDLEPGQQTAMKSCSRDDVEMVEEFDELPTDAVRRIRRELVTVTKHSPEQRQDPLC
ISITVCTVEKDRPAALDSLEEPLPGMLFFLSSGQDQQAHPQLREHPAPEASEASQPQDAAEGSSAGEEKD
ASVEPLLPAASPGGSTSQVLEAATCKKQVSQDFLETRFKIQQLLEPQQYMACLPHHIIVKIFRLLPTLSL
AILKCTCRYFKSIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGYW
MCCHQSQKGFPGCKLGLHDNHWLPACHSFNRAIHKKTRGSETEEEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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