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Report for CCDS79180.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79180.1 Public Mus musculus 13 Elovl2 23 108 98 CCDS HistoryNCBI Gene:54326Re-query CCDS DB by CCDS ID:79180.1Re-query CCDS DB by GeneID:54326See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79180.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000117096.1 ENSMUSP00000114112.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117096.1Link to Ensembl Protein Viewer:ENSMUSP00000114112.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117096Re-query CCDS DB by Protein ID:ENSMUSP00000114112
Original member Current member NCBI NM_001311121.1 NP_001298050.1 Accepted alive Link to Nucleotide Sequence:NM_001311121.1Link to Protein Sequence:NP_001298050.1Re-query CCDS DB by Nucleotide ID:NM_001311121Re-query CCDS DB by Protein ID:NP_001298050Link to BLAST:NP_001298050.1

Chromosomal Locations for CCDS 79180.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 41185294 41185407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41186853 41186987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41187429 41187553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41189946 41190117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41191888 41191965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41194647 41194834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41197135 41197150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGTTTGGACCACGAGATTCTCGAGTTCGCGGGTGGTTCCTGCTGGACTCTTACCTTCCCACCTTCATCC
TCACCATCACGTACCTGCTCTCGATATGGCTGGGTAACAAGTACATGAAGAACAGGCCTGCTCTGTCTCT
CAGGGGCATCCTCACCTTGTATAACCTCGCAATCACACTTCTTTCTGCGTATATGCTGGTGGAGCTCATC
CTCTCCAGCTGGGAAGGAGGTTACAACTTGCAGTGTCAGAATCTCGACAGTGCAGGAGAAGGTGATGTCC
GGGTAGCCAAGGTCTTGTGGTGGTACTACTTCTCCAAACTAGTGGAGTTCCTGGACACGATTTTCTTTGT
TCTACGAAAAAAGACCAATCAGATCACCTTCCTTCATGTCTATCACCACGCGTCCATGTTCAACATCTGG
TGGTGTGTTTTGAACTGGATACCTTGTGGTCAAAGCTTCTTTGGACCCACCCTGAACAGCTTTATCCACA
TTCTCATGTACTCCTACTACGGCCTGTCTGTGTTCCCGTCCATGCACAAGTACCTTTGGTGGAAGAAGTA
CCTCACACAGGCTCAGCTGGTGCAGTTCGTACTCACCATCACGCACACGCTGAGTGCCGTGGTGAAGCCC
TGTGGCTTCCCCTTTGGCTGTCTCATCTTCCAGTCTTCCTATATGATGACGCTGGTCATCCTGTTCTTAA
ACTTCTATATTCAGACATACCGGAAAAAGCCAGTGAAGAAAGAGCTGCAAGAGAAAGAAGTGAAGAATGG
TTTCCCCAAAGCCCACTTAATTGTGGCTAATGGCATGACGGACAAGAAGGCTCAATAA

Translation (275 aa):
MFGPRDSRVRGWFLLDSYLPTFILTITYLLSIWLGNKYMKNRPALSLRGILTLYNLAITLLSAYMLVELI
LSSWEGGYNLQCQNLDSAGEGDVRVAKVLWWYYFSKLVEFLDTIFFVLRKKTNQITFLHVYHHASMFNIW
WCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVFPSMHKYLWWKKYLTQAQLVQFVLTITHTLSAVVKP
CGFPFGCLIFQSSYMMTLVILFLNFYIQTYRKKPVKKELQEKEVKNGFPKAHLIVANGMTDKKAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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